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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank76Aligned Residues247
% Identity20%Templatec2qg5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:calcium/calmodulin-dependent protein kinase; PDBTitle: cryptosporidium parvum calcium dependent protein kinase cgd7_1840
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170.........180......
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Query Sequence  HDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMR
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Template Sequence  NQYYTLENTIGRGSWGEVKIAV. . . . QKGTRIRRAAKKIPKYFVE. . DVDRFKQEIEIMK
Template Known Secondary structure  TT....TTT

TTT
S..
T
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   25....30.........40...... ...50.........60..... ....70........
 
   187..190.........200.........210.........220.........230.........240......
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Query Sequence  KLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLEY
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Template Sequence  SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY
Template Known Secondary structure  T

BTTB


SS



SGGGGGTTTSS

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   7980.........90.........100.........110.........120.........130........
 
   247..250.........260.... .....270.........280.........290.........300..
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Query Sequence  IHGKPMLHRDIAARNCLY. . . . TDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETIK
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Template Sequence  CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE
Template Known Secondary structure  TT



SGGGSSSSTT




TT


TT

B



S
GGGS
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   139140.........150.........160.........170.........180.........190........
 
   303......310.........320.........330.........340.........350. ........360
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Query Sequence  TMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYRMPPY. . PHAQAEIQT
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Template Sequence  GL. YGPECDEWSAGVMMYVLLC. GYPPFSAPTDEVMLKIREGTFTFPEKDWLNVSPQAES
Template Known Secondary structure  T
.B
TT.SS
S


S


S





SSS
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   199200 .........210......... 220.........230.........240.........250......
 
   361........370.........380.
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Query Sequence  MMARCNAENPNDRPSMAEIAE
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Template Sequence  LIRRLLTKSPKQRITSLQALE
Template Known Secondary structure  S
SSTTTS

TT
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   258.260.........270........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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