Return to main results Retrieve Phyre Job Id

Job DescriptionQ22245
Confidence99.70%DateSun Jun 30 11:14:08 BST 2013
Rank396Aligned Residues97
% Identity18%Templatec2hmhA_
PDB info PDB header:cytokine regulatorChain: A: PDB Molecule:suppressor of cytokine signaling 3; PDBTitle: crystal structure of socs3 in complex with gp130(ptyr757)2 phosphopeptide.
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30...... ...40.........50.........60.........70..
Predicted Secondary structure 












..



















Query SS confidence 





















. .



































Query Sequence  IDKELYYHGLLPSEDVRQLLSN. . NGDFLLRSSEPEPGSPRTHILSVMFNNRLDDINSIK
Query Conservation       



 
 
  
  

  .. 
 



 
           


             
Alig confidence 





















..














...









......

Template Conservation 
    

 
 


 


 

     
 



 
      ...  


     ......
 
Template Sequence  LQESGFYWSAVTGGEANLLLSAEPAGTFLIRDSSDQRHF. . . FTLSVKTQSG. . . . . . TK
Template Known Secondary structure  TSSTT

TS
TT

STT
S...TT......
Template Predicted Secondary structure 





















...


......
Template SS confidence 



























































   41........50.........60.........70......... 80......... 90.
 
   73......80.... .....90.........100.........110.. .......120
Predicted Secondary structure 


.....

















..







Query SS confidence 











. . . . .



























. .







Query Sequence  HFVVNFVDGKYF. . . . . INDKMSFPSIQKMLGTYQRNNTEIKEGC. . MLVNPIRR
Query Conservation 
  
        .....      
 

 


              .. 
      
Alig confidence 











.....



























..







Template Conservation 
  
                   
 

  

  
              
  

 
Template Sequence  NLRIQEGGSFSLQSDPRSTQPVPRFDVLKLVHHYMPPQAYYIYKIPLVLSRPLSS
Template Known Secondary structure  B

TT
B
B


TT
SS



B

T












Template Predicted Secondary structure 






























Template SS confidence 






















































   92.......100.........110.........120.........130.........140......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D