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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank184Aligned Residues248
% Identity19%Templatec2c47D_
PDB info PDB header:transferaseChain: D: PDB Molecule:casein kinase 1 gamma 2 isoform; PDBTitle: structure of casein kinase 1 gamma 2
Resolution2.4 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.......
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Query Sequence  DQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMRK
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Template Sequence  PNFRVGKKIGELRLGKNL. . . . . . . . . YTNEYVAIKLEPIKSRAPQ. . . . LHLEYRFYKQ
Template Known Secondary structure  GG


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   44.....50.........60. ........70.........80 .........90
 
   188.190.........200.........210.........220.........230.........240.......
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Query Sequence  LGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLEYI
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Template Sequence  LSATEGVPQVYYFGPGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYV
Template Known Secondary structure  TTTSTTS








BTTT


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   96...100.........110.........120.........130.........140.........150.....
 
   248.250.........260....... ..270.........280.........290. ...
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Query Sequence  HGKPMLHRDIAARNCLYTDG. . . . . . KVKISDFGLTRNGTVYQIKPNTKS. . . . . . . PIR
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Template Sequence  HTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPTKKHIPYREHKSLTGTAR
Template Known Secondary structure  TT




GGG

TTSTTTTS


TT
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B









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   157..160.........170.........180.........190.........200.........210......
 
   295....300.........310.........320.........330.. .......340.........350.
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Query Sequence  WLAIETIKTMICSEKTDVWAYGVLCWEIFNNAAEPYPG. . . MKPADVATQVANGYRMPPY
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Template Sequence  YMSINTHLGKEQSRRDDLEALGHMFMYFLR. GSLPWQGLKADTLKERYQKIGDTKRATPI
Template Known Secondary structure  T

TT



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TTTT


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   218.220.........230.........240....... ..250.........260.........270......
 
   352.......360.........370.........380.........
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Query Sequence  . . . . PHAQAEIQTMMARCNAENPNDRPSMAEIAEILQRVTET
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Template Sequence  EVLCENFPEEMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR
Template Known Secondary structure  TTTS
T

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   277..280.........290.........300.........310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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