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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank66Aligned Residues250
% Identity23%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   127..130.........140.........150.........160.........170.........180......
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Query Sequence  HDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMR
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Template Sequence  SDNYDVKEELGKGAFSVVRRCV. . . . HKTTGLEFAAKIINTKKLSARDFQKLEREARICR
Template Known Secondary structure  TTTTT....TTT


SS

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   10.........20.........30. ........40.........50.........60.....
 
   187..190.........200.........210.........220.........230.........240......
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Query Sequence  KLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLEY
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Template Sequence  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY
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TTB


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S
BTT
S


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   66...70.........80.........90.........100.........110.........120.....
 
   247..250.........260.. .......270.........280.........290.........300..
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Query Sequence  IHGKPMLHRDIAARNC. . . . LYTDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETIK
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Template Sequence  CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK
Template Known Secondary structure  TT
B



SGGGS
SSTT




TT
B

TT

B


S
S
GGG

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   126...130.........140.........150.........160.........170.........180.....
 
   303......310.........320.........330.........340.........350. ........
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Query Sequence  TMICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYRMPPY. . . PHAQAEIQ
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Template Sequence  KDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  T

B
T.SS
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SSTT




TTGGGGS
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   187..190.........200........ .210.........220.........230.........240.....
 
   360.........370.........380.
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Query Sequence  TMMARCNAENPNDRPSMAEIAE
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Template Sequence  SLIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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TT
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   246...250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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