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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank239Aligned Residues243
% Identity17%Templatec2ac5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:map kinase-interacting serine/threonine kinase 2; PDBTitle: structure of human mnk2 kinase domain mutant d228g
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130..... ....140.........150.........160.........170.........180......
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Query Sequence  DQITIHKK. LGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMR
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Template Sequence  DVYQLQEDVLGEGAHARVQTCI. . . . NLITSQEYAVKIIEKQPGHIR. . SRVFREVEMLY
Template Known Secondary structure  GS
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   81........90.........100.. .......110.........120... ......130....
 
   187. .190.........200.........210.........220.........230.........240.....
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Query Sequence  KL. GHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQAAWGLE
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Template Sequence  QCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALD
Template Known Secondary structure  T


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   135....140.........150.........160.........170.........180.........190....
 
   246...250.........260.........270.........280.........290.........300.....
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Query Sequence  YIHGKPMLHRDIAARNCLYTDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETIKTMI
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Template Sequence  FLHNKGIAHRDLKPENILCEHPN. . . . QVSPVKICDFGPCGSAEYMAPEVVEAFSEEASI
Template Known Secondary structure  TTT


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GGG
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   195....200.........210....... ..220.........230.........240.........250
 
   306...310.........320.........330.... .....340.........350 .
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Query Sequence  CSEKTDVWAYGVLCWEIFNNAAEPYPGMK. . . . . . . . . . . PADVATQVANGYRMPP. . . Y
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Template Sequence  YDKRCDLWSLGVILYILLS. GYPPFVGRCGSDCGWACPACQNMLFESIQEGKYEFPDKDW
Template Known Secondary structure  TTT.SS
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   272.......280.........290 .........300.........310.........320.........330
 
   352.......360.........370.........380.
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Query Sequence  PHAQAEIQTMMARCNAENPNDRPSMAEIAE
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Template Sequence  AHISCAAKDLISKLLVRDAKQRLSAAQVLQ
Template Known Secondary structure  TTS
S
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   335....340.........350.........360....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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