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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank52Aligned Residues253
% Identity18%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160........ .170.........
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Query Sequence  ELEHDQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLD. . . . KTGKAKIKDFL
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Template Sequence  HLTMNDFSVHRIIGRGGFGEVYGCR. . . . KADTGKMYAMKCLDKKRIKMKQGETLALNER
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   185....190.........200......... 210.........220.........230.........240
 
   180.........190.........200.........210.........220.........230.........
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Query Sequence  AEARTMRKLGHQNIIKFYGVGVLQEPLYLVMELAVNGALDSFLKKNEDLSVDKKTEMILQ
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Template Sequence  IMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE
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   241........250.........260.........270.........280.........290.........300
 
   240.........250.........260.... .....270.........280.........290........
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Query Sequence  AAWGLEYIHGKPMLHRDIAARNCLY. TDGKVKISDFGLTRNGTVYQIKPNTKSPIRWLAI
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Template Sequence  IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH. ASVGTHGYMAP
Template Known Secondary structure  TT




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   301........310.........320.........330.........340........ .350.........
 
   299300.... .....310.........320.........330.. .......340.........350.....
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Query Sequence  ETIKTM. ICSEKTDVWAYGVLCWEIFNNAAEPYPG. . MKPADVATQVANGYRMPPYPHAQ
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Template Sequence  EVLQKGVAYDSSADWFSLGCMLFKLLR. GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS
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T.SS
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   360.........370.........380...... ...390.........400.........410........
 
   356...360.........370.... .....380..
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Query Sequence  AEIQTMMARCNAENPNDRP. . . . . SMAEIAEI
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Template Sequence  PELRSLLEGLLQRDVNRRLGCLGRGAQEVKES
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   419420.........430.........440.........450
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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