Job Description Q22245 Confidence 96.27% Date Sun Jun 30 11:14:08 BST 2013 Rank 437 Aligned Residues 139 % Identity 17% Template c1nw1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase (49.2 kd); PDBTitle: crystal structure of choline kinase Resolution 2.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		L	E	H	D	Q	I	T	I	H	K	K	L	G	E	G	A	F	G	E	V	S	S	G	V	M	K	F	K	K	.	.	.	G	M	K	T	V	Q	V	A	I	K	Q	V	K	L	D	K	T	G	K	A	K	I	K	D	F	L	A	E
Query Conservation																															.	.	.
Alig confidence									.																						.	.	.														.										.	.	.
Template Conservation									.																																						.										.	.	.
Template Sequence		V	P	L	E	H	L	R	.	I	S	R	I	K	G	G	M	S	N	M	L	F	L	C	R	L	S	E	V	Y	P	P	I	R	N	E	P	N	K	V	L	L	R	V	Y	F	.	N	P	E	T	E	S	H	L	V	.	.	.	A	E
Template Known Secondary structure				G	G	G			.								T	T										T	T	S			S	S	S			S									.	S									.	.	.
Template Predicted Secondary structure									.																																						.										.	.	.
Template SS confidence
		71	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.				.	.
		182	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		A	R	T	M	R	K	L	G	.	H	Q	N	I	I	K	F	Y	G	V	G	V	L	Q	E	P	L	Y	L	V	M	E	L	A	V	N	G	A	L	D	S	F	L	K	K	N	E	D	L	S	V	D	K	K	T	E	M	I	L	Q	A
Query Conservation										.
Alig confidence										.														.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		S	V	I	F	T	L	L	S	E	R	H	L	G	P	K	L	Y	G	I	F	S	G	.	.	.	.	G	R	L	E	E	Y	I	P	S	R	P	L	S	C	H	E	I	S	L	A	H	.	.	.	.	.	.	.	.	M	S	T	K	I
Template Known Secondary structure											T	T	S	S	S							T	T	.	.	.	.														T	T	G	G	G	S			.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.
		241	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	W	G	L	E	Y	I	H	G	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	R	V	A	K	V	H	Q	L	E	V	P	I	W	K	E	P	D	Y	L	C	E	A	L	Q	R	W	L	K	Q	L	T	G	T	V	D	A	E	H	R	F	D	L	P	E	E	C	G	V	S	S	V	N	C	L	D	L	A	R
Template Known Secondary structure									T	T				S	S			S	S																		S		T	T							G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
																			252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	H	R	D	I	A	A	R	N	C	L	Y	T	D	G	K	V	K	I	S	D	F	G	L	T	R	N	G	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																.
Template Sequence		E	L	E	F	L	R	A	H	I	S	L	S	K	S	P	V	T	F	C	H	N	D	L	Q	E	G	N	I	L	L	.	P	K	R	L	V	L	I	D	F	E	Y	A	S	Y	N	Y
Template Known Secondary structure											T	T										S				G	G	G				.										T	T
Template Predicted Secondary structure																																.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D