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Job DescriptionQ22245
Confidence100.00%DateSun Jun 30 11:14:08 BST 2013
Rank37Aligned Residues247
% Identity22%Templatec1koaA_
PDB info PDB header:kinaseChain: A: PDB Molecule:twitchin; PDBTitle: twitchin kinase fragment (c.elegans), autoregulated protein2 kinase and immunoglobulin domains
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   128.130.........140.........150.........160.........170.........180.......
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Query Sequence  DQITIHKKLGEGAFGEVSSGVMKFKKGMKTVQVAIKQVKLDKTGKAKIKDFLAEARTMRK
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Template Sequence  DHYDIHEELGTGAFGVVHRVT. . . . ERATGNNFAAKFVMTP. . HESDKETVRKEIQTMSV
Template Known Secondary structure  GTTT....TTTT


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   5940.........5950.........5960 .........5970...... ...5980.........5990...
 
   188.190.........200.........210........ .220.........230.........240......
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Query Sequence  LGHQNIIKFYGVGVLQEPLYLVMELAVNGAL. DSFLKKNEDLSVDKKTEMILQAAWGLEY
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Template Sequence  LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH
Template Known Secondary structure  T

TTB

TT



S
BT
TTS
B
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   5994.....6000.........6010.........6020.........6030.........6040.........6050...
 
   247..250.........260...... ...270.........280.........290.........300...
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Query Sequence  IHGKPMLHRDIAARNCLYTD. . . GKVKISDFGLTRNGTVYQIKPNTKSPIRWLAIETIKT
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Template Sequence  MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEG
Template Known Secondary structure  TT




GGGSSTTS




TT


TTS

S
TTT

T
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   6054.....6060.........6070.........6080.........6090.........6100.........6110...
 
   304.....310.........320.........330.........340.........350.... .....360
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Query Sequence  MICSEKTDVWAYGVLCWEIFNNAAEPYPGMKPADVATQVANGYRMPPYPHA. . . QAEIQT
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Template Sequence  KPVGYYTDMWSVGVLSYILLS. GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD
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B
.SS
SS

SST


S

GGGGG

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   6114.....6120.........6130.... .....6140.........6150.........6160.........6170..
 
   361........370.........380.
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Query Sequence  MMARCNAENPNDRPSMAEIAE
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Template Sequence  FIRKLLLADPNTRMTIHQALE
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   6173......6180.........6190...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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