Job Description Q22245 Confidence 99.76% Date Sun Jun 30 11:14:08 BST 2013 Rank 367 Aligned Residues 98 % Identity 24% Template c1ka6A_ PDB info PDB header:immune system Chain: A: PDB Molecule:sh2 domain protein 1a; PDBTitle: sap/sh2d1a bound to peptide n-py Resolution UNK

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		I	D	K	E	L	Y	Y	H	G	L	L	P	S	E	D	V	R	Q	L	L	S	N	.	.	.	N	G	D	F	L	L	R	S	S	E	P	E	P	G	S	P	R	T	H	I	L	S	V	M	F	N	N	R	L	D	D	I	N	S	I
Query Conservation																								.	.	.
Alig confidence																								.	.	.																.	.	.											.	.	.	.	.	.
Template Conservation																																										.	.	.											.	.	.	.	.	.
Template Sequence		M	D	A	V	A	V	Y	H	G	K	I	S	R	E	T	G	E	K	L	L	L	A	T	G	L	D	G	S	Y	L	L	R	D	S	E	S	V	P	G	V	.	.	.	Y	C	L	C	V	L	Y	H	G	Y	.	.	.	.	.	.	I
Template Known Secondary structure						S	S	B			S																T	T								S	S	S	T	T		.	.	.							S	S	S		.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.											.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50							.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		K	H	F	V	V	N	F	V	D	G	K	Y	F	I	.	.	.	.	.	.	N	D	K	M	S	F	P	S	I	Q	K	M	L	G	T	Y	Q	R	N	N	T	E	I	K	E	G	C	M	L	V	N	P	I	R	R	Q
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	Y	R	V	S	Q	T	E	T	G	S	W	S	A	E	T	A	P	G	V	H	K	R	Y	F	R	K	I	K	N	L	I	S	A	F	Q	K	P	D	Q	G	I	V	I	P	L	Q	Y	P	V	E	K	K	S	S
Template Known Secondary structure										T	T	S							S	T	T	S						S	S								T	T	S	S		S	S	S	S	S				S	B			S	S
Template Predicted Secondary structure
Template SS confidence
		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D