301 d1topa_ Probab=97.91   E-value=0.0014  Score=43.26  Aligned_columns=140  Identities=24%

Q ss_pred             CCHHHHHHHHHHHHHCCC-CCCEECHHHHHHHHHHCCCC--HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             189999999999875187-78735399999999856999--889999979838899986589999999999999977899
Q batch____         7 VSDAEYQKNFAMFGQLTG-GQPFMDAVTARNALMRSNLP--TQVLSQIWALSDLDKDGRLDIREYSIAMRLALNCLAGIP   83 (1085)
Q Consensus         7 ~~~~~~~~~~~~f~~~~~-~~g~~~g~~a~~~~~~s~l~--~~~l~~iw~l~d~~~~g~l~~~ef~~am~li~~~~~g~~   83 (1085)
                      +|+++...+..+|+.++. ++|.|+-+.-+.+|...+..  .......|.-.+.++.+..+..+|...+........   
T Consensus        14 ls~~e~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   90 (162)
T d1topa_          14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA---   90 (162)
T ss_dssp             SCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH---
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC---
T ss_conf             99999999999999978797881979999999984057999889998764211100000000002456654210110---


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             95217841236788899987788888888888878888888888888888887888888877787776778776667778
Q batch____        84 IPPQLPPSLLVVPARNAPPTWPGSRHGSVDYSQTLPPAIDRRMSQSYIPSAPVSIAGTPSSRHNSISAGSPLNNDRNVFE  163 (1085)
Q Consensus        84 ~P~~lP~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (1085)
                                                                                                      
T Consensus        91 --------------------------------------------------------------------------------   90 (162)
T d1topa_          91 --------------------------------------------------------------------------------   90 (162)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf             888778788700134477763102766678666024666667548--987898876664155656644888999867
Q batch____       164 GRQLENWAIPHHNKLKYSQLFNALDKERLGSLSSQVGRSALGLSG--LPTNVLAHIWFLSDVNKDGKLSVDEYAISQ  238 (1085)
Q Consensus       164 ~~~~~~w~i~~~~~~~y~~~f~~~d~~~~g~i~g~~a~~~~~~s~--l~~~~L~~iw~L~d~~~~g~l~~~ef~~am  238 (1085)
                               .......+...|...+....+++.-.....++...+  +....+..++...|.+.+|.++.+||+-.|
T Consensus        91 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~D~d~dG~Is~~EF~~~l  158 (162)
T d1topa_          91 ---------KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM  158 (162)
T ss_dssp             ---------HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             ---------CCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf             ---------00000000000000001243101256799999870899998999999999688978838499999999


