Job Description Q9U2T9 Confidence 85.79% Date Fri May 3 21:47:53 BST 2013 Rank 498 Aligned Residues 69 % Identity 9% Template c4dckA_ PDB info PDB header:transport protein/signaling protein Chain: A: PDB Molecule:sodium channel protein type 5 subunit alpha; PDBTitle: crystal structure of the c-terminus of voltage-gated sodium channel in2 complex with fgf13 and cam Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																								.																	.	.	.	.																		.	.
Query SS confidence																								.																	.	.	.	.																		.	.
Query Sequence		N	P	W	E	V	S	D	A	E	Y	Q	K	N	F	A	M	F	G	Q	L	T	G	.	G	Q	P	F	M	D	A	V	T	A	R	N	A	L	M	R	.	.	.	.	S	N	L	P	T	Q	V	L	S	Q	I	W	A	L	S	D	L	.	.	D	K	D	G	R	L	D	I	R	E	Y	S	I	A	M
Query Conservation																								.																	.	.	.	.																		.	.
Alig confidence																								.																	.	.	.	.															.			.	.
Template Conservation																																																											.
Template Sequence		S	T	E	P	L	S	E	D	D	F	D	M	F	Y	E	I	W	E	K	F	D	P	E	A	T	Q	F	I	E	Y	S	V	L	S	D	F	A	D	A	L	S	E	P	L	R	I	A	K	P	N	Q	I	S	L	I	N	M	.	D	L	P	M	V	S	G	D	R	I	H	C	M	D	I	L	F	A	F
Template Known Secondary structure			S	S		B																	T	T			S				G	G	G								S		T	T	T				S	S								S	.						T	T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		1782	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.		.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D