Job Description Q9U2T9 Confidence 98.15% Date Fri May 3 21:47:53 BST 2013 Rank 275 Aligned Residues 142 % Identity 19% Template c3ox6C_ PDB info PDB header:calcium binding protein Chain: C: PDB Molecule:calcium-binding protein 1; PDBTitle: crystal structure of the calcium sensor calcium-binding protein 12 (cabp1) Resolution 2.40 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																					.																			.	.
Query SS confidence																					.																			.	.
Query Sequence		E	V	S	D	A	E	Y	Q	K	N	F	A	M	F	G	Q	L	T	G	.	G	Q	P	F	M	D	A	V	T	A	R	N	A	L	M	R	S	N	.	.	L	P	T	Q	V	L	S	Q	I	W	A	L	S	D	L	D	K	D	G	R	L	D	I	R	E	Y	S	I	A	M	R	L	A	L	N	C	L	A	G	I
Query Conservation																					.																			.	.
Alig confidence																					.																			.	.																																								.
Template Conservation																																																																																	.
Template Sequence		S	L	R	P	E	E	I	E	E	L	R	E	A	F	R	E	F	D	K	D	K	D	G	Y	I	N	C	R	D	L	G	N	C	M	R	T	M	G	Y	M	P	T	E	M	E	L	I	E	L	S	Q	Q	I	N	M	N	L	G	G	H	V	D	F	D	D	F	V	E	L	M	G	P	K	L	L	A	E	T	A	.
Template Known Secondary structure																							S	S	S													T	T																	T	T	S	T	T																	T				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	P	P	Q	L	P	P	S	L	L	V	V	P	A	R	N	A	P	P	T	W	P	G	S	R	H	G	S	V	D	Y	S	Q	T	L	P	P	A	I	D	R	R	M	S	Q	S	Y	I	P	S	A	P	V	S	I	A	G	T	P	S	S	R	H	N	S	I	S	A	G	S	P	L	N	N	D	R	N	V	F
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		E	G	R	Q	L	E	N	W	A	I	P	H	H	N	K	L	K	Y	S	Q	L	F	N	A	L	D	K	E	R	L	G	S	L	S	S	Q	V	G	R	S	A	L	G	L	S	.	.	.	G	L	P	T	N	V	L	A	H	I	W	F	L	S	D	V	N	K	D	G	K	L	S	V	D	E	Y	A	I	S	Q
Query Conservation																																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	M	I	G	V	K	E	L	R	D	A	F	R	E	F	D	T	N	G	D	G	E	I	S	T	S	E	L	R	E	A	M	R	A	L	L	G	H	Q	V	G	H	R	D	I	E	E	I	I	R	D	V	D	L	N	G	D	G	R	V	D	F	E	E	F	V	R	M	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.																	T	T		S	S	S	B														S	S																T	T	S	S	S	S	B									T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D