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Job DescriptionQ9U2T9
Confidence96.10%DateFri May 3 21:47:53 BST 2013
Rank447Aligned Residues134
% Identity16%Templatec3dtpF_
PDB info PDB header:contractile proteinChain: F: PDB Molecule:myosin regulatory light chain; PDBTitle: tarantula heavy meromyosin obtained by flexible docking to2 tarantula muscle thick filament cryo-em 3d-map
Resolution20.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.... .....30.........40.........50.........60.........70.........80.....
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Query Sequence  VSDAEYQKNFAMFGQLTG. GQPFMDAVTARNALMRSNLPTQVLSQIWALSDLDKDGRLDIREYSIAMRLALNCLAGIPIP
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Template Sequence  FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTE. . QELDSMVAEAPGPINFTMFLTIFGDR. . . . . . . . . .
Template Known Secondary structure  S
SSSSGGGTTT
SSSSS


GGGTTTGGGGSS



S..SSGGG
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   51........60.........70.........80.........90.. .......100.........110........
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
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Query Sequence  PQLPPSLLVVPARNAPPTWPGSRHGSVDYSQTLPPAIDRRMSQSYIPSAPVSIAGTPSSRHNSISAGSPLNNDRNVFEGR
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   166...170.........180.........190.........200........ .210.........220.........230........
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Query Sequence  QLENWAIPHHNKLKYSQLFNALDKERLGSLSSQVGRSALGLSG. . LPTNVLAHIWFLSDVNKDGKLSVDEYAISQ
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Template Sequence  . . . . . . IAGTDEEDVIVNAFNLFDEGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQIL
Template Known Secondary structure  ......TSTTTTTTTTTS
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B
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   119120.........130.........140.........150.........160.........170.........180.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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