Job Description Q9U2T9 Confidence 97.04% Date Fri May 3 21:47:53 BST 2013 Rank 400 Aligned Residues 131 % Identity 24% Template c1qxpB_ PDB info PDB header:hydrolase chimera Chain: B: PDB Molecule:mu-like calpain; PDBTitle: crystal structure of a mu-like calpain Resolution 2.80 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																	.																			.	.
Query SS confidence																	.																			.	.
Query Sequence		A	E	Y	Q	K	N	F	A	M	F	G	Q	L	T	G	.	G	Q	P	F	M	D	A	V	T	A	R	N	A	L	M	R	S	N	.	.	L	P	T	Q	V	L	S	Q	I	W	A	L	S	D	L	D	K	D	G	R	L	D	I	R	E	Y	S	I	A	M	R	L	A	L	N	C	L	A	G	I	P	I	P	P
Query Conservation																	.																			.	.
Alig confidence																	.																			.	.							.																													.	.	.	.	.	.	.	.	.
Template Conservation																																												.																													.	.	.	.	.	.	.	.	.
Template Sequence		N	R	I	R	N	Y	L	T	I	F	R	K	F	D	L	D	K	S	G	S	M	S	A	Y	E	M	R	M	A	I	E	A	A	G	F	K	L	P	C	Q	L	H	.	Q	V	I	V	A	R	F	A	D	D	E	L	I	I	D	F	D	N	F	V	R	C	L	V	R	L	E	I	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												G	G	G		S	S	S	S	S	B											T	T	T	T									.								S		S	S	S			B														.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.		.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	P	P	S	L	L	V	V	P	A	R	N	A	P	P	T	W	P	G	S	R	H	G	S	V	D	Y	S	Q	T	L	P	P	A	I	D	R	R	M	S	Q	S	Y	I	P	S	A	P	V	S	I	A	G	T	P	S	S	R	H	N	S	I	S	A	G	S	P	L	N	N	D	R	N	V	F	E	G	R	Q
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.																														210	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	E	N	W	A	I	P	H	H	N	K	L	K	Y	S	Q	L	F	N	A	L	D	K	E	R	L	G	S	L	S	S	Q	V	G	R	S	A	L	G	L	S	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	N	V	L	A	H	I
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	F	K	I	F	K	Q	L	D	P	E	N	T	G	T	I	Q	L	D	L	I	S	W	L	S	F	S	V	L	M	H	Y	S	N	N	E	S	E	E	R	Q	F	R	K	L	F	V	Q	L	M	E	V	S	A	T	E	L	M	F	G	I	D	T	C	R	S	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.										T	T			S																										T	T	T	T			S	S							S	T	T	T				S					T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	F	L	S	D	V	N	K	D	G	K	L	S	V	D	E	Y	A	I	S	Q	Y	M	I	E	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	V	M	D	S	D	T	T	G	K	L	G	F	E	E	F	K	Y	L	W	N	N	I	K	K
Template Known Secondary structure							S	S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		773	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D