Job Description Q9U2T9 Confidence 84.74% Date Fri May 3 21:47:53 BST 2013 Rank 500 Aligned Residues 351 % Identity 8% Template c1hciB_ PDB info PDB header:triple-helix coiled coil Chain: B: PDB Molecule:alpha-actinin 2; PDBTitle: crystal structure of the rod domain of alpha-actinin Resolution 2.8 Å

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		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	D	N	L	S	K	G	Q	A	E	L	E	R	R	R	R	V	L	E	E	E	E	Q	R	R	R	A	E	V	E	K	K	E	R	E	E	E	A	K	K	N	R	E	R	Q	E	K	E	R	Q	A	E	V	E	R	Q	A	E	L	E	R	Q	R	I	I	E	A	Q	R	E	E	E	E	K	K	R	R	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	Q	E	N	E	R	L	M	E	E	Y	E	R	L	A	S	E	L	L	E	W	I	R	R	T	I	P	W	L	E	N	R	T	P	E	K	T	M	Q	A	M	Q	K	K	L	E	D	F	R	D	Y	R	R	K	H	K	P	P	K	V	Q	E	K	C	Q	L	E	I	N	F	N	T	L	Q	T	K	L	R	I
Template Known Secondary structure																						T									T	T						S	S	S	T	T	T	T													T											T	T	T					T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.				450	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		M	E	R	R	R	E	E	D	E	K	M	R	K	V	Q	M	E	K	A	K	V	K	Q	M	Q	N	Q	K	Q	Q	E	N	E	R	L	A	Q	R	Q	Q	R	E	K	T	L	Q	F	Q	L	Q	A	L	D	E	K	V	I	D	V	E	V	D	I	G	K	A	K	E	A	V	A	E	V	T	G	.	.	.	F	I
Query Conservation																																																																													.	.	.
Alig confidence																																																																													.	.	.
Template Conservation
Template Sequence		S	N	R	P	A	F	M	P	S	E	G	K	M	V	S	D	I	A	G	A	W	Q	R	L	E	Q	A	E	K	G	Y	E	E	W	L	L	N	E	I	R	R	L	E	R	L	E	H	L	A	E	K	F	R	Q	K	A	S	T	H	E	T	W	A	Y	G	K	E	Q	I	L	L	Q	K	D	Y	E	S	A	S	L
Template Known Secondary structure		T	T	S							G	G	G		S	S	S													T	T																																		T	T									G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	M	R	S	T	R	D	E	K	V	A	R	I	K	E	L	Q	E	T	N	Q	K	T	A	I	E	S	Q	E	L	G	H	Q	L	L	Q	K	Q	S	A	H	K	E	T	T	Q	R	K	S	E	L	E	A	L	R	R	K	R	D	A	I	R	K	A	I	E	D	A	A	L	E	L	S	T	E	K	E	K	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	V	R	A	L	L	R	K	H	E	A	F	E	S	D	L	A	A	H	Q	D	R	V	E	Q	I	A	A	I	A	Q	E	L	N	E	L	D	Y	H	D	A	V	N	V	N	D	R	C	Q	K	I	C	D	Q	W	D	R	L	G	T	L	T	Q	K	R	R	E	A	L	E	R	M	E	K	L	L	E	T	I
Template Known Secondary structure																																						T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	Q	T	E	I	L	K	T	N	K	E	K	Y	K	T	D	V	Y	S	K	L	V	A	K	R	E	E	Y	R	N	S	F	E	L	L	V	H	A	Q	T	H	A	R	S	K	I	G	E	F	E	A	K	S	A	P	A	S	A	A	P	A	P	A	P	A	P	A	P	T	T	T	N	G	F	P	A	N	F	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	L	H	L	E	F	A	K	R	A	A	P	F	N	N	W	M	E	G	A	M	E	D	L	Q	D	M	F	I	V	H	S	I	E	E	I	Q	S	L	I	T	A	H	E	Q	F	K	A	T	L	P	E	A	D	G	E	R	Q	S	I	M	A	I	Q	N	E	V	E	K	V	I	Q	S	Y	N	I	R	I	S
Template Known Secondary structure																										T	T						S	S																																									T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	G	E	F	D	K	T	D	A	S	Q	R	F	D	A	D	F	G	A	T	S	T	A	D	P	F	A	Q	I	A	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	N	P	Y	S	T	V	T	M	D	E	L	R	T	K	W	D	K	V	K	Q	L	V	P	I	R	D	Q	S	L	Q	E	E
Template Known Secondary structure		S			T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D