Job Description Q9U2T9 Confidence 97.67% Date Fri May 3 21:47:53 BST 2013 Rank 331 Aligned Residues 123 % Identity 22% Template c1eg4A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:dystrophin; PDBTitle: structure of a dystrophin ww domain fragment in complex2 with a beta-dystroglycan peptide Resolution 2.00 Å

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		17	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	F	G	Q	L	T	.	.	G	G	Q	P	F	M	D	A	V	T	A	R	N	A	L	M	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	L	P	T	Q	V	L	S	Q	I	W	A	L	S	D	L	D	K	D	G	R	L	D	I	R	E	Y	S	I	A	M	R	L	A	L	N	C	L
Query Conservation									.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	A	L	D	Q	H	N	L	K	Q	N	D	Q	P	M	D	I	L	Q	I	I	N	C	L	T	T	I	Y	D	R	L	E	Q	E	H	N	N	L	V	N	V	P	L	C	V	D	M	C	L	N	W	L	L	N	V	Y	D	T	G	R	T	G	R	I	R	V	L	S	F	K	T	G	I	I	S	L	.	.	.	.
Template Known Secondary structure							T	T				T	T	S																						S	S	S	S																				T	T			S														T	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	I	P	I	P	P	Q	L	P	P	S	L	L	V	V	P	A	R	N	A	P	P	T	W	P	G	S	R	H	G	S	V	D	Y	S	Q	T	L	P	P	A	I	D	R	R	M	S	Q	S	Y	I	P	S	A	P	V	S	I	A	G	T	P	S	S	R	H	N	S	I	S	A	G	S	P	L	N	N	D	R
Query Conservation
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	F	E	G	R	Q	L	E	N	W	A	I	P	H	H	N	K	L	K	Y	S	Q	L	F	N	A	L	D	K	E	R	L	G	S	L	S	S	Q	V	G	R	S	A	L	G	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	P	T	N	V	L	A	H	I	W	F	L	S	D	V	N
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.												.	.							.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.												.	.							.																																																.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	C	K	A	H	L	E	D	K	Y	R	Y	.	.	L	F	K	Q	V	A	.	S	S	T	G	F	C	D	Q	R	R	L	G	L	L	L	H	D	S	I	Q	I	P	R	Q	L	G	E	V	A	S	F	G	G	S	N	I	E	P	S	V	R	S	C	F	Q	F	A	.	.	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S	S	S									.	.						S	.		T	T	S		B																			T	T		G	G	G	G	T		S													T	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.												.	.							.																																																.	.
Template SS confidence
												207	.	.	210	.	.	.	.	.	.	.			.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	G	K	L	S	V	D	E	Y	A	I	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	P	E	I	E	A	A	L	F	L	D	W	M
Template Known Secondary structure		T		S		B
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D