Phyre 2 alignment of Q9U2T9 with c2kybA_

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Job Description | Q9U2T9
Confidence | 87.62% | Date | Fri May 3 21:47:53 BST 2013
Rank | 495 | Aligned Residues | 34
% Identity | 9% | Template | c2kybA_
PDB info | PDB header:toxin | Chain: A: PDB Molecule:mannosyl-glycoprotein endo-beta-n-acetylglucosamidase | PDBTitle: solution structure of cpr82g from clostridium perfringens. north east2 structural genomics consortium target cpr82g
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1045 | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | F | K | T | G | D | V | I | I | V | T | D | K | S | E | A | E | W | W | S | G | H | R | E | Q | D | P | S | K | S | G | L | F | P | S | N | Y | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | L | S | G | N | T | K | V | T | I | V | G | E | E | . | G | A | F | Y | K | I | E | Y | K | . | . | . | G | S | H | G | Y | V | A | K | E | Y | I
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  | B | T | . | . | . | T | B |  |  |  |  |  | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |  | . | . | . | . | . | . | . | . | . |  |  |  | 50 | . | . | . | . | . | . | . | . | . | 60

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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