Phyre 2 alignment of Q9U2T9 with c1x27F_

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Job Description | Q9U2T9
Confidence | 99.44% | Date | Fri May 3 21:47:53 BST 2013
Rank | 165 | Aligned Residues | 54
% Identity | 28% | Template | c1x27F_
PDB info | PDB header:signaling protein | Chain: F: PDB Molecule:proto-oncogene tyrosine-protein kinase lck; | PDBTitle: crystal structure of lck sh2-sh3 with sh2 binding site of2 p130cas
Resolution | 2.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1029 | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | A | T | A | V | Y | D | Y | E | A | S | Q | P | D | E | L | G | F | K | T | G | D | V | I | I | V | T | D | K | S | E | A | E | W | W | S | G | H | R | E | Q | D | P | S | K | S | G | L | F | P | S | N | Y | V | Q | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | V | I | A | L | H | S | Y | E | P | S | H | D | G | D | L | G | F | E | K | G | E | Q | L | R | I | L | E | Q | . | S | G | E | W | W | K | A | Q | . | S | L | T | T | G | Q | E | G | F | I | P | F | N | F | V | A | K
Template Known Secondary structure |  |  |  |  |  | S | S |  | B |  |  |  | S | T | T | B |  |  | B |  | T | T |  |  |  |  |  |  |  |  | . | B | T | T |  |  |  |  |  | . |  | S | S | S |  |  |  |  |  |  |  | G | G | G |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |  | . | . | . | . | . | . | 100 | . |  | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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