Phyre 2 alignment of Q9U2T9 with c3pvlA_

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Job Description | Q9U2T9
Confidence | 97.94% | Date | Fri May 3 21:47:53 BST 2013
Rank | 298 | Aligned Residues | 52
% Identity | 27% | Template | c3pvlA_
PDB info | PDB header:motor protein/protein transport | Chain: A: PDB Molecule:myosin viia isoform 1; | PDBTitle: structure of myosin viia myth4-ferm-sh3 in complex with the cen1 of2 sans
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1028 | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 | . | . | . | . | . | . | . | . |  |  |  |  |  | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | R | A | T | A | V | Y | D | Y | E | A | S | Q | P | D | E | L | G | F | K | T | G | D | V | I | I | V | T | D | K | S | . | . | . | . | . | E | A | E | W | W | S | G | H | R | E | Q | D | P | S | K | S | G | L | F | P | S | N | Y | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | Y | V | V | A | L | Q | D | N | . | . | P | N | S | G | F | L | S | F | A | K | G | D | L | I | I | L | D | H | D | T | G | E | Q | V | M | N | S | G | W | A | N | G | I | . | N | E | R | T | K | Q | R | G | D | F | P | T | D | C | V
Template Known Secondary structure |  |  |  |  |  |  | S | S |  |  | . | . |  |  |  |  | B |  |  |  |  | T | T |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  | . |  | T | T | T |  |  |  |  |  |  |  | G | G | G |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 1568 | . | 1570 | . | . | . | . | . | . |  |  | . | . | . | 1580 | . | . | . | . | . | . | . | . | . | 1590 | . | . | . | . | . | . | . | . | . | 1600 | . | . | . | . | . | . | . | . | . |  | 1610 | . | . | . | . | . | . | . | . | . | 1620 | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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