Return to main results Retrieve Phyre Job Id

Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank124Aligned Residues253
% Identity34%Templatec4hzsA_
PDB info PDB header:transferaseChain: A: PDB Molecule:activated cdc42 kinase 1; PDBTitle: crystal structure of ack1 kinase domain with c-terminal sh3 domain
Resolution3.23 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   212.......220.........230.........240.........250....... ..260.........270.........280.........290
Predicted Secondary structure 














.






Query SS confidence 













































.
































Query Sequence  LNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHL. SANEKILFLREANVMLTLSHPNVIKFYGVCTMK
Query Conservation 
          

 
 

 
  
            



 
     .          
   
  
 




         
Alig confidence 






























.













.






























.
Template Conservation 
    
     

 
 

 

          .   



 
                
   
  
 




       . 
Template Sequence  IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGK. TVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL. T
Template Known Secondary structure 

GGG



B

TTS
TTS
.

S



ST


TTB


.S
Template Predicted Secondary structure 












.













.
Template SS confidence 















































































   121........130.........140.........150. ........160.........170.........180.........190....... .
 
   291........300.........310.........320.........330.........340.........350.........360.........370
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  EPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKGV
Query Conservation      

 
    


   
                 

  

 


   







 



      

 




    
Alig confidence 











































































....
Template Conservation       
      
 
                                                             ....
Template Sequence  PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLM. . . .
Template Known Secondary structure  SS



SS
BSTT
S
TT


S

SGGGSSSS


TT....
Template Predicted Secondary structure 





























































....
Template SS confidence 















































































   199200.........210.........220.........230.........240.........250.........260.........270....
 
   371........380.........390.........400.........410.........420.........430.........440.........450
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  AIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVELPVFI
Query Conservation               
 


 
       







  
 

 
 
  

             
             
  
Alig confidence  .....











































..




























Template Conservation  .....                       














 
  

..           
                
Template Sequence  . . . . . RALPVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW. . IGLNGSQILHKIDKEGERLPRPEDCPQDI
Template Known Secondary structure  .....



GGG





TTT

TT..TT

TS






TTS
Template Predicted Secondary structure  .....


























..















Template SS confidence 















































































   275....280.........290.........300.........310........ .320.........330.........340.......
 
   451........460.........470.......
Predicted Secondary structure 






Query SS confidence 


























Query Sequence  ANIFEQSRQYETEDRISSKQIIQIFKE
Query Conservation    

   
   
  


  

      
Alig confidence 


























Template Conservation    

   
   
  


   

  
  
Template Sequence  YNVMVQCWAHKPEDRPTFVALRDFLLE
Template Known Secondary structure  T
SSGGGS

Template Predicted Secondary structure 






Template SS confidence 


























   361........370.........380.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D