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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank269Aligned Residues257
% Identity22%Templatec4f9bC_
PDB info PDB header:transferase/transferase inhibitorChain: C: PDB Molecule:cell division cycle 7-related protein kinase; PDBTitle: human cdc7 kinase in complex with dbf4 and pha767491
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240.........250.........260.........270..... ....280.........290..
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Query Sequence  NEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTL. SHPNVIKFYGVCTMKEP
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Template Sequence  SNVFKIEDKIGEGTFSSVYLATAQLQ. VGPEEKIALKHLIPTSH. . . . PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH
Template Known Secondary structure  GGT
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TTS
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   55....60.........70.........80 .........90....... ..100.........110.........120.........
 
   293......300.........310.........320.........330.........340.........350..... ....360.......
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Query Sequence  IMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSK. KILKISDFGLSV. . . .
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Template Sequence  VVIAMPYLEHESFLDIL. . . . NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD
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....TT

TT
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SGGGTTTT

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   130.........140...... ...150.........160.........170.........180.........190.........200.....
 
   368.370.........380.........390.... .....400.........410.........420.........430....
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Query Sequence  . . . . KGVAIKERKGGCLPVKYMAPETLKKGL. YSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAII. . . . . . . .
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Template Sequence  TKIELLKFVQSEAQRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS. GRYPFYKASDDLTALAQIMTIRGSRETI
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GGGGG


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   206...210.........220.........230.........240.........250...... ...260.........270.........280....
 
   435....440.........450.........460.........470.........480....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . GKRISLAVEVELPVFIANIFEQSRQYETEDRISSKQIIQIFKEEVGFHEI
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Template Sequence  QAAKTFGKSILCSKEVPAQDLRKLCERLRGWNEVPDEAYDLLDKLLDLNPASRITAEEALL. . . . HPFFKDM
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   438.440.........450.........460.........470.........480.........490........ .500.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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