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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank137Aligned Residues258
% Identity28%Templatec4f1oA_
PDB info PDB header:transferase, signaling proteinChain: A: PDB Molecule:serine/threonine-protein kinase roco4; PDBTitle: crystal structure of the l1180t mutant roco4 kinase domain from d.2 discoideum bound to appcp
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   211........220.........230.........240.........250........ .260.........270.........280.....
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Query Sequence  QLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLS. . . . . ANEKILFLREANVMLTLSHPNVIKFYG
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Template Sequence  TLADNEIEYEKQIGKGGFGLVHKGRLVKD. . . . KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG
Template Known Secondary structure  B

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   1020.........1030.........1040........ .1050.........1060.........1070.........1080.........1090.....
 
   286...290.........300.........310.........320.........330......... 340.........350.... ....
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Query Sequence  VCTMKEPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQ. . VIHRDIAARNCLLNS. . . . . KKIL
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Template Sequence  LMH. . NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCA
Template Known Secondary structure  T..TTT

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   1096.. .1100.........1110.........1120.........1130.........1140.........1150.........1160.........1170...
 
   359360.........370.........380.........390. ........400.........410.........420.........430......
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Query Sequence  KISDFGLSVKGVAIKERKGGCLPVKYMAPETLK. . KGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGK
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Template Sequence  KVADFGTS. . QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT. GEGPFDEYSYGKIKFINMIREE
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   1174.....1180. ........1190.........1200.........1210.........1220........ .1230.........1240.........1250
 
   437..440.........450.........460.........470.......
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Query Sequence  RISLAVEVELPVFIANIFEQSRQYETEDRISSKQIIQIFKE
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Template Sequence  GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE
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   1251........1260.........1270.........1280.........1290.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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