Job Description O01798 Confidence 100.00% Date Fri May 3 21:22:31 BST 2013 Rank 54 Aligned Residues 247 % Identity 24% Template c4dn5A_ PDB info PDB header:transferase Chain: A: PDB Molecule:mitogen-activated protein kinase kinase kinase 14; PDBTitle: crystal structure of nf-kb-inducing kinase (nik) Resolution 2.50 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	L	N	N	E	Q	V	T	L	N	K	K	L	G	E	G	Q	F	G	E	V	H	K	G	S	L	K	T	S	V	F	A	A	P	V	T	V	A	V	K	T	L	H	Q	N	H	L	S	A	N	E	K	I	L	F	L	R	E	A	N	V	M	L	T	L	S	H	P	N	V	I	K	F	Y	G	V	C	T	M
Query Conservation
Alig confidence																																.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.																	.	.	.	.	.	.	.
Template Sequence		Y	R	E	E	V	H	W	A	T	H	Q	L	R	L	G	R	G	S	F	G	E	V	H	R	M	E	D	K	Q	T	.	.	.	.	G	F	Q	C	A	V	K	K	V	R	L	E	V	F	R	A	.	.	.	.	.	.	.	E	E	L	M	A	C	A	G	L	T	S	P	R	I	V	P	L	Y	G	A	V	R	E
Template Known Secondary structure				B	T	T	T					S	S		S				S	S									T	T	T	.	.	.	.											T	T	T			T	.	.	.	.	.	.	.					T	T	S	S				T	T	B
Template Predicted Secondary structure																																.	.	.	.																	.	.	.	.	.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.					.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.								.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		K	E	P	I	M	I	V	M	E	F	C	D	G	K	S	L	E	D	A	L	L	S	K	E	E	K	V	S	A	E	D	K	I	L	Y	L	F	H	A	A	C	G	I	D	Y	L	H	G	K	Q	V	I	H	R	D	I	A	A	R	N	C	L	L	N	S	K	K	I	.	L	K	I	S	D	F	G	L	S	V	K
Query Conservation																																																																						.
Alig confidence																											.																																											.
Template Conservation																											.
Template Sequence		G	P	W	V	N	I	F	M	E	L	L	E	G	G	S	L	G	Q	L	V	K	E	Q	G	C	.	L	P	E	D	R	A	L	Y	Y	L	G	Q	A	L	E	G	L	E	Y	L	H	S	R	R	I	L	H	G	D	V	K	A	D	N	V	L	L	S	S	D	G	S	H	A	A	L	C	D	F	G	H	A	V	C
Template Known Secondary structure		T	T										T	T		B									S	S	.																							T	T				S			S	G	G	G					T	T	S									T	T
Template Predicted Secondary structure																											.
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.		.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A	I	K	E	R	K	G	G	C	L	P	V	K	Y	M	A	P	E	T	L	K	K	G	L	Y	S	T	A	S	D	I	Y	S	Y	G	A	L	M	Y	E	V	Y	T	D	G	K	T	P	F	E	T	C	G	L	R	G	N	E	L	R	K	A	I	I	G	K	R	I	S	L	A	V	E	V	E	L	P	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																							.							.
Template Conservation		.	.	.	.	.	.	.																																							.							.
Template Sequence		.	.	.	.	.	.	.	L	Q	I	P	G	T	E	T	H	M	A	P	E	V	V	L	G	R	S	C	D	A	K	V	D	V	W	S	S	C	C	M	M	L	H	M	L	N	.	G	C	H	P	W	T	.	Q	F	F	R	G	P	L	C	L	K	I	A	S	E	P	P	P	V	R	E	I	P	P	S	C	A	P
Template Known Secondary structure		.	.	.	.	.	.	.					S		G	G	G							T	T					T																	.	S	S		T	T	T	.	T	T			S									S			G	G	G	G	S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																							.							.
Template SS confidence
									541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.		.	580	.	.	.	.		.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	A	N	I	F	E	Q	S	R	Q	Y	E	T	E	D	R	I	S	S	K	Q	I	I	Q	I	F	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	A	Q	A	I	Q	E	G	L	R	K	E	P	I	H	R	V	S	A	A	E	L	G	G	K	V	N	R
Template Known Secondary structure											S		S	S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D