Job Description O01798 Confidence 100.00% Date Fri May 3 21:22:31 BST 2013 Rank 274 Aligned Residues 258 % Identity 25% Template c4aaaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cyclin-dependent kinase-like 2; PDBTitle: crystal structure of the human cdkl2 kinase domain Resolution 1.53 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	T	L	N	K	K	L	G	E	G	Q	F	G	E	V	H	K	G	S	L	K	T	S	V	F	A	A	P	V	T	V	A	V	K	T	L	H	Q	N	H	L	S	A	N	E	K	I	L	F	L	R	E	A	N	V	M	L	T	L	S	H	P	N	V	I	K	F	Y	G	V	C	T	M	K	E	P	I	M
Query Conservation
Alig confidence																											.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		E	K	Y	E	N	L	G	L	V	G	E	G	S	Y	G	M	V	M	K	C	R	N	K	D	T	.	.	.	.	G	R	I	V	A	I	K	K	F	L	E	S	D	D	D	K	M	V	K	K	I	A	M	R	E	I	K	L	L	K	Q	L	R	H	E	N	L	V	N	L	L	E	V	C	K	K	K	K	R	W	Y
Template Known Secondary structure		G	G							G	G	G	G	T	T	S	S							T	T	T	.	.	.	.											S		S	S																					T	T	B										T	T
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	M	E	F	C	D	G	K	S	L	E	D	A	L	L	S	K	E	E	K	V	S	A	E	D	K	I	L	Y	L	F	H	A	A	C	G	I	D	Y	L	H	G	K	Q	V	I	H	R	D	I	A	A	R	N	C	L	L	N	S	K	K	I	L	K	I	S	D	F	G	L	S	V	K	G	V	A	I	K	E
Query Conservation
Alig confidence																		.																																																								.	.	.	.	.	.	.	.
Template Conservation																		.																																																								.	.	.	.	.	.	.	.
Template Sequence		L	V	F	E	F	V	D	H	T	I	L	D	D	L	E	L	.	F	P	N	G	L	D	Y	Q	V	V	Q	K	Y	L	F	Q	I	I	N	G	I	G	F	C	H	S	H	N	I	I	H	R	D	I	K	P	E	N	I	L	V	S	Q	S	G	V	V	K	L	C	D	F	G	F	A	.	.	.	.	.	.	.	.
Template Known Secondary structure								S										.	S	T	T																								T	T								G	G	G					T	T	S								T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																																																								.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
Predicted Secondary structure																				.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	G	G	C	L	P	V	K	Y	M	A	P	E	T	L	K	K	.	G	L	Y	S	T	A	S	D	I	Y	S	Y	G	A	L	M	Y	E	V	Y	T	D	G	K	T	P	F	E	T	C	G	L	R	G	N	E	L	R	K	A	I	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																				.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																.																						.						.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																						.						.	.
Template Sequence		.	.	.	E	V	A	T	R	W	Y	R	A	P	E	L	L	V	G	D	V	K	Y	G	K	A	V	D	V	W	A	I	G	C	L	V	T	E	M	F	M	.	G	E	P	L	F	.	.	P	G	D	S	D	I	D	Q	L	Y	H	I	M	M	C	L	G	N	L	I	P	R	H	Q	E	L	F	N	K	N	P	V
Template Known Secondary structure		.	.	.						T	T							T	T		T	T			T																	.	S	S		S		.	.			S	S														S													G	G
Template Predicted Secondary structure		.	.	.																																						.						.	.
Template SS confidence
					161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
													436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	K	R	I	S	L	A	V	E	V	E	L	P	V	F	I	A	N	I	F	E	Q	S	R	Q	Y	E	T	E	D	R	I	S	S	K	Q	I	I	Q	I	F	K	E	E	V	G	F	H	E	I	E	T	S	G	I	L	H	K	L	V	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		F	A	G	V	R	L	P	E	I	K	E	R	E	P	L	E	R	R	Y	P	K	L	S	E	V	V	I	D	L	A	K	K	C	L	H	I	D	P	D	K	R	P	F	C	A	E	L	L	H	.	.	.	.	H	D	F	F	Q	M	D	G	F	A	E	R	F	S	Q	E	L	Q
Template Known Secondary structure		G	T	T							S	S								S	T	T	S												T		S	S	G	G	G	S			G	G	G	G	G	G	.	.	.	.	S					G	G	G
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D