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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank198Aligned Residues239
% Identity26%Templatec3udbF_
PDB info PDB header:transferaseChain: F: PDB Molecule:serine/threonine-protein kinase srk2e; PDBTitle: crystal structure of snrk2.6
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   212.......220.........230.........240.........250.........260.........270.........280.........290.
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Query Sequence  LNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMKE
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Template Sequence  HDSDRYELVKDIGAGNFGVARLMRDKQA. . . . NELVAVKYIERGEKIDEN. . . VKREIINHRSLRHPNIVRFKEVILTPT
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TTT


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S
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   16...20.........30.........40... ......50.........60. ........70.........80........
 
   292.......300.........310.........320.........330.........340.........350..... ....360.........
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Query Sequence  PIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSK. . KILKISDFGLSVKG
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Template Sequence  HLAIVMEYASGGELFERICNAGR. FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYT. . .
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BSSS.

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   8990.........100.........110. ........120.........130.........140.........150.........160....
 
   370.........380.........390.........400.........410.........420...... ...430.........440.......
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Query Sequence  VAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRG. . NELRKAIIGKRISLAVEVELP
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Template Sequence  . . . . . . . . . . . PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV. GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHIS
Template Known Secondary structure  ...........GGG


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   180.........190.........200.........210.. .......220.........230.........240.......
 
   448.450.........460.........470...
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Query Sequence  VFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  PECRHLISRIFVADPAKRISIPEIRN
Template Known Secondary structure  S
SSGGGS

TT
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   248.250.........260.........270...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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