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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank237Aligned Residues260
% Identity24%Templatec3txoA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:protein kinase c eta type; PDBTitle: pkc eta kinase in complex with a naphthyridine
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250.........260. ........270..... ....280.........290..
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Query Sequence  EQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANE. KILFLREANVMLTL. SHPNVIKFYGVCTMKEP
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Template Sequence  DNFEFIRVLGKGSFGKVMLARVKET. . . . GDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDR
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TTTTT....

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   353......360.........370....... ..380.........390.........400.........410.........420........
 
   293......300.........310.........320.........330.........340.........350.........360.........370..
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Query Sequence  IMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKGVAI
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Template Sequence  LFFVMEFVNGGDLMFHIQKSRR. FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMC. . . . . .
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   429430.........440.........450 .........460.........470.........480.........490.........500.
 
   373......380.........390.........400.........410.........420.........430.........440.........450..
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Query Sequence  KERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVELPVFIAN
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Template Sequence  . . KEGICGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC. GHAPF. . EAENEDDLFEAILNDEV. . VYPTWLHEDATG
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   502.......510.........520.........530.........540 ..... ....550.........560.. .......570....
 
   453......460.........470. ........480.........490..
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Query Sequence  IFEQSRQYETEDRISSKQI. . IQIFKEEVGFHEIETSGILHK
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Template Sequence  ILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHR
Template Known Secondary structure  T
SSGGGSTTSGGGT
TTSGGGTT

TT
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   584.....590.........600.........610.........620.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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