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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank294Aligned Residues243
% Identity25%Templatec3ttjA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:mitogen-activated protein kinase 10; PDBTitle: crystal structure of jnk3 complexed with cc-359, a jnk inhibitor for2 the prevention of ischemia-reperfusion injury
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   210.........220.........230.........240.........250.........260.........270.........280.........
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Query Sequence  WQLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTM
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Template Sequence  FTVL. KRYQNLKPIGSGAQGIVCAAYDAVL. . . . DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP
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   58.60. ........70.........80...... ...90.........100.........110.........120.........130..
 
   290.........300.........310.........320.........330.........340.........350.........360...
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Query Sequence  . . . . . . KEPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDF
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Template Sequence  QKTLEEFQDVYLVMELMDANLCQVIQ. . . . MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF
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   133......140.........150........ .160.........170.........180.........190.........200........
 
   364.....370.........380.........390.........400.........410.........420.........430...
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Query Sequence  GLSVKGVAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAI. . . . . . . . . .
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Template Sequence  GLASFMMVTRY. . . . . . . . . YRAPEVILGMGYKENVDIWSVGCIMGEMVR. HKILF. . PGRDYIDQWNKVIEQLGTPCPE
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   209210......... 220.........230.........240......... 250.... .....260.........270......
 
   434.....440.........450.........460.........470...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IGKRISLAVEVELPVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ
Template Known Secondary structure  TTS
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   286...290.........300.........310.........320.........330.........340.........350.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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