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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank26Aligned Residues250
% Identity23%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240.........250.........260.........270.........280.........290...
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Query Sequence  NEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMKEPI
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Template Sequence  TEEYQLFEELGKGSVVRRCVKVLA. . . . . . GQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH
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TTT......TS
S


BTTB


SS
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   10.........20.........30... ......40.........50.........60.........70.........80...
 
   294.....300.........310.........320.........330.........340.........350....... ..360.........370
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Query Sequence  MIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKI. . . LKISDFGLSVKGV
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Template Sequence  YLIFDLVTGGELFEDIVARE. YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE
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B

B
S.


TT
B



SSTTSBSSTT




SS
B


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   86...90.........100..... ....110.........120.........130.........140.........150.........160....
 
   371..... ...380.........390.........400.........410.........420.........430.........440... ....
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Query Sequence  AIKERK. GGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVE. . VELP
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Template Sequence  GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPF. . WDEDQHRLYQQIKAGAYDFPSPEWDTVT
Template Known Secondary structure  TT

B


S
S
GGG

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S
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SST




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   165....170.........180.........190.........200........ .210... ......220.........230.........240.
 
   448.450.........460.........470...
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Query Sequence  VFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  PEAKDLINKMLTINPSKRITAAEALK
Template Known Secondary structure  S
SSTTTS

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   242.......250.........260.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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