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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank181Aligned Residues251
% Identity21%Templatec3rp9A_
PDB info PDB header:transferaseChain: A: PDB Molecule:mitogen-activated protein kinase; PDBTitle: crystal structure of the apo mapk from toxoplasma gondii, 25.m01780 or2 tgme49_007820
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   206...210.........220.........230.........240.........250.........260.........270.........280.....
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Query Sequence  ARHGWQLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYG
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Template Sequence  PHSDWQIP. DRYEIRHLHVCEAYDKLRV. . . . . . . . . . . . . VAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLD
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   45....50.. .......60.........70. ........80.........90.........100.........110
 
   286. ..290.........300.........310.........320.........330.........340.........350.........360
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Query Sequence  VC. . . . . TMKEPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKI
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Template Sequence  IVIPKDVEKFDELYVVLEIADSDFKKLFR. . TPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKV
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   120.........130.........140........ .150.........160.........170.........180.........190.......
 
   361........370.... .....380......... 390.........400.........410.........420...
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Query Sequence  SDFGLSVKGVAIKE. RKGGCLPVKYMAPET. LKKGLYSTASDIYSYGALMYEVYTDGKTPFETCG. . . . . . . . . . . . . . .
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Template Sequence  CDFGLARTVDYPENGNSQLPVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN. MIKENVAYHADRGPLFPTRGNRDQ
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   198.200.........210.........220.........230.........240.........250.. .......260.........270......
 
   424.....430.........440..... ....450.........460.........470...
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Query Sequence  . . . . . . . . . . . . . . . . . . LRGNELRKAIIGKRISLAVEVE. . . . . LPVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  LNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA
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   324.....330.........340.........350.........360.........370.........380.........390......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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