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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank13Aligned Residues273
% Identity22%Templatec3pfqA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein kinase c beta type; PDBTitle: crystal structure and allosteric activation of protein kinase c beta2 ii
Resolution4.00 Å
Model Dimensions (Å)X:80.897 Y:82.319 Z:60.661

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  WQLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHL. SANEKILFLREANVMLTL. SHPNVIKFYGVC
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Template Sequence  PVPPLTDFNFLMVLGKGSFGKVMLSERKGT. . . . DELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF
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TTSSBTTTB
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   289290.........300.........310........ .320.........330.........340.........350.........360....
 
   288.290.........300.........310.........320.........330.........340.........350.........360.......
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Query Sequence  TMKEPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSV
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Template Sequence  QTMDRLYFVMEYVNGGDLMYHIQQVG. RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK
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   411........420.........430...... ...440.........450.........460.........470.........480.........
 
   368.370.........380.........390.........400.........410.........420.........430.........440.......
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Query Sequence  KGVAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVELP
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Template Sequence  ENIWDGVTTKFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA. GQAPF. . EGEDEDELFQSIMEHNV. . AYPKSMS
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TT

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   490.........500.........510.........520.........530..... ....540 .........550....... ..560....
 
   448.450.........460........ .470.........480.........490..
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Query Sequence  VFIANIFEQSRQYETEDRISS. KQIIQIFKEEVGFHEIETSGILHK
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Template Sequence  KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERK
Template Known Secondary structure  S
SSSTT
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   566...570.........580.........590.........600.........610.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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