Job Description O01798 Confidence 99.16% Date Fri May 3 21:22:31 BST 2013 Rank 409 Aligned Residues 78 % Identity 21% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																						.	.																													.										.	.	.	.	.	.
Query SS confidence																						.	.																													.										.	.	.	.	.	.
Query Sequence		N	F	P	F	Y	H	G	F	M	G	R	N	E	C	E	A	M	L	S	N	.	.	H	G	D	F	L	I	R	M	T	E	I	G	K	R	V	A	Y	V	I	S	I	K	W	K	Y	Q	N	I	.	H	V	L	V	K	R	T	K	T	.	.	.	.	.	.	K	K	L	Y	W	T	K	K	Y	A	F	K	S	I
Query Conservation																						.	.																													.										.	.	.	.	.	.
Alig confidence								.														.	.											.																		.										.	.	.	.	.	.
Template Conservation								.																										.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	.	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L
Template Known Secondary structure				T	T			.												T	T	S		T	T								S	.	S		T	T										T	T											S		S	S	T	T	S			S					T	T				S	S
Template Predicted Secondary structure								.																										.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		182	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	L	I	A	Y	H	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	I	V	E	Y	L	Q
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D