Job Description O01798 Confidence 98.29% Date Fri May 3 21:22:31 BST 2013 Rank 426 Aligned Residues 135 % Identity 21% Template c3lzhA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aph(2")-id/aph(2")-iva; PDBTitle: crystal structure of aminoglycoside phosphotransferase aph(2")-2 id/aph(2")-iva Resolution 2.00 Å

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		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290	.	.	.				.
Predicted Secondary structure																																																													.	.	.															.	.	.
Query SS confidence																																																													.	.	.															.	.	.
Query Sequence		K	K	L	G	E	G	Q	F	G	E	V	H	K	G	S	L	K	T	S	V	F	A	A	P	V	T	V	A	V	K	T	L	H	Q	N	H	L	S	A	N	E	K	I	L	F	L	R	E	A	N	V	M	L	T	L	S	H	P	N	.	.	.	V	I	K	F	Y	G	V	C	T	M	K	E	P	I	.	.	.	M
Query Conservation																																																													.	.	.															.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.										.	.	.	.																								.	.	.															.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.										.	.	.	.
Template Sequence		E	I	S	G	E	G	N	D	C	I	A	Y	E	I	.	.	.	.	.	.	.	.	.	N	G	N	F	I	F	K	F	P	.	.	.	.	K	H	S	R	A	S	I	N	L	L	N	E	V	T	V	L	K	T	I	H	N	E	L	S	L	P	I	P	E	V	V	F	T	G	X	P	S	E	X	C	Q	X	S	F
Template Known Secondary structure								S	S							.	.	.	.	.	.	.	.	.	T	T	T							.	.	.	.	S	S																		T	T		S	S	S													S	S		S		S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	M	E	F	C	D	G	K	S	L	E	D	A	L	L	S	K	E	E	K	V	S	A	E	D	K	I	L	Y	L	F	H	A	A	C	G	I	D	Y	L	H	G	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.
Template Sequence		A	G	F	T	K	I	K	G	V	P	L	T	P	L	L	L	K	N	.	.	.	L	P	K	Q	S	Q	D	Q	A	A	K	D	L	A	R	F	L	S	E	L	H	S	I	N	I	S	G	F	K	S	N	L	V	L	D	F	R	E	K	I	N	E	D	N	K	K	I	K	K	L	L	S	R	E	L	K	G	H	Q
Template Known Secondary structure																				.	.	.	S																						S			T	T	S		G	G	G	B																		T	T	T	T	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
																									340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	I	H	R	D	I	A	A	R	N	C	L	L	N	S	K	K	.	.	I	L	K	I	S	D	F	G	L	S	V	K	G	V	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		X	K	K	V	D	D	F	Y	R	D	I	L	D	N	E	I	Y	F	K	Y	Y	P	C	L	I	H	N	D	F	S	S	D	H	I	L	F	D	T	E	K	N	T	I	C	G	I	I	D	F	G	D	A	A	I	S	D	P
Template Known Secondary structure														T		G	G	G	T									S	S		S	G	G	G					T	T	T	T									T	T						T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D