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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank222Aligned Residues261
% Identity25%Templatec3lm0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase 17b; PDBTitle: crystal structure of human serine/threonine kinase 17b (stk17b)
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   211........220.........230.........240.........250.........260.........270...... ...280.........
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Query Sequence  QLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLS. HPNVIKFYGVCTM
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Template Sequence  NFNNFYILTSKELGRGKFAVVRQCISKST. . . . GQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN
Template Known Secondary structure 
SSTTT....

STT
TTT
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   27..30.........40.........50..... ....60.........70.........80.........90.........100..
 
   290.........300.........310... ......320.........330.........340.........350..... ....360.....
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Query Sequence  KEPIMIVMEFCDGKSLEDALLSKE. EKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSK. . . KILKISDFGL
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Template Sequence  TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM
Template Known Secondary structure  SS

TTGGGGGSGGG
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GGGS
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TT
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   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   366...370.........380.........390.........400.........410.........420.........430.........440. ..
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Query Sequence  SVKGVAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLA. . VE
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Template Sequence  S. . . . . . . . . RKIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT. HTSPF. . VGEDNQETYLNISQVNVDYSEETF
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SGGG

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   183 ......190.........200.........210.........220. ..... ...230.........240.........250
 
   444.....450.........460.........470.........480.........490.
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Query Sequence  VELPVFIANIFEQSRQYETEDRISSKQIIQIFKEEVGFHEIETSGILH
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Template Sequence  SSVSQLATDFIQSLLVKNPEKRPTAEICLS. . . . HSWLQQWDFENLFH
Template Known Secondary structure  TTS
S
SSGGGS

T....
GGG



TTS


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   260.........270.........280......... 290.........300...
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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