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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank50Aligned Residues243
% Identity29%Templatec3lijA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin dependent protein kinase with PDBTitle: crystal structure of full length cpcdpk3 (cgd5_820) in2 complex with ca2+ and amppnp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240.........250.........260.........270.........280.........290...
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Query Sequence  NEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMKEPI
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Template Sequence  SEMYQRVKKLGSGE. . . VLLCRDKVT. . . . HVERAIKIIRKSSN. . . . . SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY
Template Known Secondary structure 

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TT.....TT


TTB


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   5960.........70.. .......80. ........90..... ....100.........110.........120......
 
   294.....300.........310.........320.........330.........340.........350.. .......360.........370
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Query Sequence  MIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLL. . . NSKKILKISDFGLSVKGV
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Template Sequence  YLVMECYKGGELFDEIIHRMK. FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE
Template Known Secondary structure 


S
BSS.

TT
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TT

B
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   135....140.........150..... ....160.........170.........180.........190.........200.........210...
 
   371........380.........390.........400.........410.........420.........430.........440.... ....
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Query Sequence  AIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEV. . ELPV
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Template Sequence  NQKKMKERLGTAYYIAPEVLRK. KYDEKCDVWSIGVILFILLA. GYPPF. . GGQTDQEILRKVEKGKYTFDSPEWKNVSE
Template Known Secondary structure  TTB
B



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TTT

TT.
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T.SS
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SST




SGGGTTS
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   214.....220.........230..... ....240.........250..... ....260 .........270.........280.........
 
   449450.........460.........470...
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Query Sequence  FIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  GAKDLIKQMLQFDSQRRISAQQALE
Template Known Secondary structure  T
SSTTTS

T
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   290.........300.........310....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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