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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank129Aligned Residues253
% Identity27%Templatec3ku2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   212.......220.........230.........240.........250.........260. ........270.........280.........290
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Query Sequence  LNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANE. KILFLREANVMLTLSHPNVIKFYGVCTMK
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Template Sequence  IFSDRYKGQRVLGKGSFGEVILCKDKIT. . . . GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK
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   46...50.........60.........70... ......80.........90.........100.........110.........120.
 
   291........300.........310.........320.........330.........340.........350.. .......360.......
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Query Sequence  EPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLL. . . NSKKILKISDFGLSV
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Template Sequence  GYFYLVGEVYTGGELFDEII. SRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST
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   122.......130.........140. ........150.........160.........170.........180.........190.........200
 
   368.370.........380.........390.........400.........410.........420.........430.........440 .....
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Query Sequence  KGVAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISL. . AVEVE
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Template Sequence  HFEASKKMKDKIGTAYYIAPEVLH. GTYDEKCDVWSTGVILYILLS. GCPPF. . NGANEYDILKKVEKGKYTFELPQWKK
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   201........210.........220.... .....230.........240..... ....250 .........260.........270......
 
   446...450.........460.........470...
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Query Sequence  LPVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  VSESAKDLIRKMLTYVPSMRISARDALD
Template Known Secondary structure  S
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   277..280.........290.........300....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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