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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank213Aligned Residues253
% Identity24%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   210.........220.........230.........240.........250.........260.........270.........280.........
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Query Sequence  WQLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTM
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Template Sequence  LELQ. KKYHLKGAIGQGSYGVVRVAIENQT. . . . RAIRAIKIMNKNKIRQKDVERIKTEVRLMKKLHHPNIARLYEVYED
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Query Sequence  KEPIMIVMEFCDGKSLEDAL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSKEEKVSAEDKILYLFHAACGI
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Template Sequence  EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDFVQREKLISNIMRQIFSAL
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Query Sequence  DYLHGKQVIHRDIAARNCLLNSK. . KILKISDFGLSVKGVAIKERKGGCLPVKYMAPETL. . KKGLYSTASDIYSYGALM
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Template Sequence  HYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGAGT. . . PYFVAPEVLNTTNESYGPKCDAWSAGVLL
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   164.....170.........180.........190.........200.........210. ........220.........230.........240
 
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Query Sequence  YEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEV. . ELPVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  HLLLM. GAVPF. . PGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ
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   249250... ..... .260.........270.........280.........290.........300.........310..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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