Job Description O01798 Confidence 99.46% Date Fri May 3 21:22:31 BST 2013 Rank 402 Aligned Residues 85 % Identity 21% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																						.	.																							.													.	.
Query SS confidence																						.	.																							.													.	.
Query Sequence		N	F	P	F	Y	H	G	F	M	G	R	N	E	C	E	A	M	L	S	N	.	.	H	G	D	F	L	I	R	M	T	E	I	G	K	R	V	A	Y	V	I	S	I	K	.	W	K	Y	Q	N	I	H	V	L	V	K	R	.	.	T	K	T	K	K	L	Y	W	T	K	K	Y	A	F	K	S	I	C	E	L	I
Query Conservation																						.	.																							.													.	.
Alig confidence									.													.	.											.												.													.	.
Template Conservation									.																									.
Template Sequence		N	H	P	Y	Y	F	P	.	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	.	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I
Template Known Secondary structure		T		T	T	B			.											T	T	S		T	T									.	S	T	T											T	T																				S	S	S				S	S
Template Predicted Secondary structure									.																									.
Template SS confidence
		9	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	H	K	R	N	H	K	P	I	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	Y	L	Q	N	K	I	R	L	L	N
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D