Job Description O01798 Confidence 100.00% Date Fri May 3 21:22:31 BST 2013 Rank 258 Aligned Residues 220 % Identity 24% Template c3famA_ PDB info PDB header:transferase Chain: A: PDB Molecule:carbon catabolite-derepressing protein kinase; PDBTitle: crystal structure of the protein kinase domain of yeast amp-2 activated protein kinase snf1 Resolution 2.20 Å

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		220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		N	K	K	L	G	E	.	G	Q	F	G	E	V	H	K	G	S	L	K	T	S	V	F	A	A	P	V	T	V	A	V	K	T	L	H	Q	N	H	L	S	A	N	E	K	I	L	F	L	R	E	A	N	V	M	L	T	L	S	H	P	N	V	I	K	F	Y	G	V	C	T	M	K	E	P	I	M	I	V	M	E
Query Conservation								.
Alig confidence								.															.	.	.	.																		.	.	.	.
Template Conservation																							.	.	.	.																		.	.	.	.
Template Sequence		G	A	H	I	G	N	Y	Q	I	V	K	K	V	K	L	A	Y	H	T	T	T	.	.	.	.	G	Q	K	V	A	L	K	I	I	N	K	K	V	M	Q	G	R	.	.	.	.	I	E	R	E	I	S	Y	L	R	L	L	R	H	P	H	I	I	K	L	Y	D	V	I	K	S	K	D	E	I	I	M	V	I	E
Template Known Secondary structure				B				B		S										T	T	T	.	.	.	.											S							.	.	.	.														T	T	B										S	S
Template Predicted Secondary structure																							.	.	.	.																		.	.	.	.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	D	G	K	S	L	E	D	A	L	L	S	K	E	E	K	V	S	A	E	D	K	I	L	Y	L	F	H	A	A	C	G	I	D	Y	L	H	G	K	Q	V	I	H	R	D	I	A	A	R	N	C	L	L	N	S	K	K	I	L	K	I	S	D	F	G	L	S	V	K	G	V	A	I	K	E	R	K	G	G
Query Conservation
Alig confidence													.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	G	N	E	L	F	D	Y	I	V	.	.	Q	R	D	K	M	S	E	Q	E	A	R	R	F	F	Q	Q	I	I	S	A	V	E	Y	C	H	R	H	K	I	V	H	R	D	L	K	P	E	N	L	L	L	D	E	H	L	N	V	K	I	A	D	F	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													.	.	T	S	S	S																							T	T							S	G	G	G					T	T	S							S	S		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	P	V	K	Y	M	A	P	E	T	L	K	K	G	L	Y	S	T	A	S	D	I	Y	S	Y	G	A	L	M	Y	E	V	Y	T	D	G	K	T	P	F	E	T	C	G	L	R	G	N	E	L	R	K	A	I	I	G	K	R	I	S	L	A	V	E	V	E	L	P	V	F	I	A	N	I	F	E	Q	S	R
Query Conservation
Alig confidence		.	.	.	.	.	.																														.						.	.																		.	.
Template Conservation		.	.	.	.	.	.																														.						.	.																		.	.
Template Sequence		.	.	.	.	.	.	S	P	N	Y	A	A	P	E	V	I	S	G	P	E	V	D	V	W	S	C	G	V	I	L	Y	V	M	L	C	.	R	R	L	P	F	.	.	D	D	E	S	I	P	V	L	F	K	N	I	S	N	G	V	Y	.	.	T	L	P	K	F	L	S	P	G	A	A	G	L	I	K	R	M	L
Template Known Secondary structure		.	.	.	.	.	.			T	T									T																	.	S	S		S	S	.	.			S	S											T			.	.				T	T	S												S
Template Predicted Secondary structure		.	.	.	.	.	.																														.						.	.																		.	.
Template SS confidence
								199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.			250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Y	E	T	E	D	R	I	S	S	K	Q	I	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	N	P	L	N	R	I	S	I	H	E	I	M	Q
Template Known Secondary structure			S	S	G	G	G	S							T	T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D