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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank219Aligned Residues240
% Identity24%Templatec3db8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:polo-like kinase 1; PDBTitle: crystal structure of an activated (thr->asp) polo-like2 kinase 1 (plk1) catalytic domain in complex with compound3 041
Resolution3.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250...... ...260.........270.........280.........290...
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Query Sequence  EQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNH. LSANEKILFLREANVMLTLSHPNVIKFYGVCTMKEPI
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Template Sequence  KRYMRGRFLGKGGFAKCYEITDMDT. . . . KEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFV
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   37..40.........50.........60. ........70.........80.........90.........100.........110..
 
   294.....300.........310.........320.........330.........340.........350.........360.........370...
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Query Sequence  MIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKGVAIK
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Template Sequence  YVVLEICRRRSLLELHKRRKA. VTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI. . . .
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   113......120.........130... ......140.........150.........160.........170.........180.......
 
   374.....380.........390.........400.........410.........420.........430.........440.........450...
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Query Sequence  ERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVELPVFIANI
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . HSFEVDIWSLGCILYTLLV. GKPPF. . ETSCLKETYIRIKKNE. . YSVPRHINPVASAL
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   214.....220.........230.. ..... ..240.........250... ......260.......
 
   454.....460.........470... ......480.........
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Query Sequence  FEQSRQYETEDRISSKQIIQ. . IFKEEVGFHEIETSGI
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Template Sequence  IRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCL
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SSGGGS

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   268.270.........280.........290.........300.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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