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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank59Aligned Residues253
% Identity24%Templatec3d9vA_
PDB info PDB header:transferaseChain: A: PDB Molecule:rho-associated protein kinase 1; PDBTitle: crystal structure of rock i bound to h-1152p a di-2 methylated variant of fasudil
Resolution3.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   211........220.........230.........240.........250....... ..260.........270.........280.........
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Query Sequence  QLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHL. SANEKILFLREANVMLTLSHPNVIKFYGVCTM
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Template Sequence  RMKAEDYEVVKVIGRGAFGEVQLVRHKST. . . . RKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD
Template Known Secondary structure  S

GGG
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   70.........80.........90........ .100.........110.........120.........130.........140.....
 
   290.........300.........310.........320.........330.........340.........350.........360.........
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Query Sequence  KEPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKG
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Template Sequence  DRYLYMVMEYMPGGDLVNLM. . SNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM
Template Known Secondary structure  SS


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   146...150.........160..... ....170.........180.........190.........200.........210.........220...
 
   370.... .....380.........390 .........400.........410.........420.........430...... ...440.
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Query Sequence  VAIKE. . RKGGCLPVKYMAPETL. . . . KKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGK. . RISLA
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Template Sequence  NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV. GDTPF. . YADSLVGTYSKIMNHKNSLTFP
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   224.....230.........240.........250.........260.........270... ..... .280.........290.........300
 
   442.......450.........460..... ....470...
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Query Sequence  VEVELPVFIANIFEQSRQYETEDR. . . ISSKQIIQ
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Template Sequence  DDNDISKEAKNLICAFLT. DREVRLGRNGVEEIKR
Template Known Secondary structure  S
TTS
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   301........310........ .320.........330....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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