Job Description O01798 Confidence 97.41% Date Fri May 3 21:22:31 BST 2013 Rank 440 Aligned Residues 117 % Identity 15% Template c3csvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution Resolution 2.15 Å

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		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	T	V	A	V	K	T	L	H	Q	N	H	L	S	A	N	E	K	I	L	F	L	R	E	A	N	V	M	L	T	L	S	H	P	N	V	I	K	F	Y	G	V	C	T	M	K	E	P	I	M	I	V	M	E	F	C	D	G	K	S	L	E	D	A	L	L	S	K	E	E	K	V	S	A	E	D	K	I	L
Query Conservation
Alig confidence																				.	.																.								.	.																									.	.	.	.	.
Template Conservation																				.	.																.								.	.																									.	.	.	.	.
Template Sequence		G	A	K	A	V	L	X	D	W	S	P	E	E	G	G	D	T	Q	.	.	P	F	V	D	L	A	Q	Y	L	R	N	L	D	I	S	.	A	P	E	I	Y	A	E	.	.	E	H	A	R	G	L	L	L	I	E	D	L	G	D	A	L	F	T	E	V	I	N	N	D	.	.	.	.	.	P	A	Q	E	X	P
Template Known Secondary structure												T	T	T	T			S		.	.												T	T		B	.								.	.		T	T	T	T									S		B									.	.	.	.	.	G	G	G
Template Predicted Secondary structure																				.	.																.								.	.																									.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.																																																									.	340	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	F	H	A	A	C	G	I	D	Y	L	H	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	V	I	H	R	D	I	A	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	R	A	A	V	D	L	L	I	H	L	H	D	A	Q	T	P	E	L	A	R	L	D	P	E	T	L	S	E	X	T	R	L	A	F	S	E	Y	R	Y	A	I	L	G	D	A	A	E	D	N	R	K	R	F	E	H	R	F	A	Q	I	L	S	A	Q	L	E	G	D	X	V	F	V	H	R	D	F	H	A
Template Known Secondary structure															T	S							B									T	T	T					T							S	S																							S							S			S	G
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		348	.	350	.	.	.	.	.	.	.					.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure												.	.	.	.
Query SS confidence												.	.	.	.
Query Sequence		R	N	C	L	L	N	S	K	K	I	.	.	.	.	L	K	I	S	D	F	G	L	S	V	K	G	V
Query Conservation												.	.	.	.
Alig confidence												.	.	.	.
Template Conservation
Template Sequence		Q	N	L	L	W	L	P	E	R	E	G	L	A	R	V	G	V	I	D	F	Q	D	A	K	L	G	H
Template Known Secondary structure		G	G					T	T	S		G	G	G	G							T	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D