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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank224Aligned Residues243
% Identity21%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   210.........220.........230.........240.........250.........260.........270...... ...280.......
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Query Sequence  WQLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLS. . HPNVIKFYGVC
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Template Sequence  MSVKGRIYSILKQIGSGGSSKVFQVLNEKK. . . . . QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE
Template Known Secondary structure  TT

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   518.520.........530.........540....... ..550.........560.........570.........580.........590..
 
   288.290.........300.........310.........320.........330.........340.........350.........360.......
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Query Sequence  TMKEPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSV
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Template Sequence  ITDQYIYMVMECGNIDLNSWLK. . KKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD. GMLKLIDFGIA.
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   593......600.........610.... .....620.........630.........640.........650....... ..660........
 
   368.370.........380.........390.... .....400.........410.........420.........430.........440......
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Query Sequence  KGVAIKERKGGCLPVKYMAPETLKKGL. YSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVEL
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Template Sequence  . . . . . . . . . . NQGTVNYMPPEAIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQ. QIINQISKLHAIIDPNHEIEFPDIP
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   669670.........680.........690.........700..... ....710. ........720.........730......
 
   447..450.........460.........470...
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Query Sequence  PVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  EKDLQDVLKCCLKRDPKQRISIPELLA
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T
SSTTTS

T
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   761........770.........780.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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