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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank57Aligned Residues251
% Identity21%Templatec2y7jB_
PDB info PDB header:transferaseChain: B: PDB Molecule:phosphorylase b kinase gamma catalytic chain, PDBTitle: structure of human phosphorylase kinase, gamma 2
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250.........260. ........270...... ...280.........290
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Query Sequence  EQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANE. . . KILFLREANVMLTLS. HPNVIKFYGVCTMK
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Template Sequence  QKYDPKDVIGRGVSSVVRRCVHRAT. . . . GHEFAVKIMEVTASPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS
Template Known Secondary structure 
SSTTT....

TT

TT
TTB

BS
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   22.......30.........40...... ...50.........60.........70.........80.........90.......
 
   291........300.........310.........320.........330.........340.........350.........360.........370
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Query Sequence  EPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKGV
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Template Sequence  SFMFLVFDLMRKGELFDYLTEKVA. LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE
Template Known Secondary structure  S


TTSS.

TT



SGGG
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TT


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   101........110.........120.... .....130.........140.........150.........160.........170.........
 
   371........380.........390. ........400.........410.........420.........430.........440...
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Query Sequence  AIKERKGGCLPVKYMAPETLK. . . . . . KGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVE.
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Template Sequence  PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA. GSPPF. . WHRRQILMLRMIMEGQYQFSSPE
Template Known Secondary structure  TT

B



S
GGG


TTS

B
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   180.........190.........200.........210.........220........ .230... ......240.........250......
 
   444.....450.........460.........470...
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Query Sequence  . VELPVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  WDDRSSTVKDLISRLLQVDPEARLTAEQALQ
Template Known Secondary structure  TT

S
SSTTTS

T
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   257..260.........270.........280.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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