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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank193Aligned Residues248
% Identity24%Templatec2qr8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:ribosomal protein s6 kinase alpha-3; PDBTitle: 2.0a x-ray structure of c-terminal kinase domain of p90 ribosomal s62 kinase 2 (rsk2)
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   214.....220.........230.........240.........250.........260.........270.... .....280.........290..
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Query Sequence  NEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLT. LSHPNVIKFYGVCTMKEP
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Template Sequence  TDGYEVKEDIGVGSYSVCKRCIHKAT. . . . NMEFAVKIIDKSKRD. . . . . . PTEEIEILLRYGQHPNIITLKDVYDDGKY
Template Known Secondary structure  TTT
SSTTT....TTTT

......TTTSTTB


SS
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   419420.........430.........440.... .....450......... 460.........470.........480........
 
   293......300.........310.........320.........330.........340.........350...... ...360........
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Query Sequence  IMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKK. . . . ILKISDFGLSVK
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Template Sequence  VYVVTELMKGGELLDKIL. RQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ
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B.T
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   489490.........500...... ...510.........520.........530.........540.........550.........560.......
 
   369370.... .....380.........390.........400.........410.........420. ........430.........440. ...
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Query Sequence  GVAIKE. RKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFET. CGLRGNELRKAIIGKRISLA. . VEV
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Template Sequence  LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT. GYTPFANGPDDTPEEILARIGSGKFSLSGGYWN
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B
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   568.570.........580.........590.........600.........610... ......620.........630.........640......
 
   445....450.........460.........470...
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Query Sequence  ELPVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  SVSDTAKDLVSKMLHVDPHQRLTAALVLR
Template Known Secondary structure  TS
S
SSTTTS

T
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   647..650.........660.........670.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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