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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank188Aligned Residues245
% Identity31%Templatec2qofA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase and juxtamembrane region, y596f mutant
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  QLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMK
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Template Sequence  ELDATNISIDKVVGAGEFGEVCSGRLKLPS. KKEISVAIKTLKVG. YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS
Template Known Secondary structure  B

GGG
SSS
TT.S


TT.

TT


TTB


SS
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   615....620.........630.........640.... .....650........ .660.........670.........680.........690..
 
   291........300.........310.........320.........330.........340.........350.........360.........370
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Query Sequence  EPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKGV
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Template Sequence  KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFPIR. . . .
Template Known Secondary structure  SS


TT
BTTTT
S
TT


S


GGG
TT





GG....
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   693......700.........710.........720.........730.........740.........750.........760........
 
   371........380.........390.........400.........410.........420.........430.........440.........450
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Query Sequence  AIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVELPVFI
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Template Sequence  . . . . . . . . . . . . . WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY. . WEMSNQDVIKAVDEG. YRLPPPMDCPAAL
Template Known Secondary structure  .............GS




TTS

TT..TT

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TT
B
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   790.........800.........810.........820..... ....830.........840 .........850...
 
   451........460.........470.......
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Query Sequence  ANIFEQSRQYETEDRISSKQIIQIFKE
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Template Sequence  YQLMLDCWQKDRNNRPKFEQIVSILDK
Template Known Secondary structure  T
SSGGGS

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   854.....860.........870.........880
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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