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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank143Aligned Residues252
% Identity32%Templatec2qobA_
PDB info PDB header:transferaseChain: A: PDB Molecule:ephrin receptor; PDBTitle: human epha3 kinase domain, base structure
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   211........220.........230.........240.........250.........260.........270.........280.........290
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Query Sequence  QLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMK
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Template Sequence  ELDATNISIDKVVGAGEFGEVCSGRLKLPSKK. EISVAIKTLKVG. YTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS
Template Known Secondary structure  B

GGG
SSS
TTS
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TT.

TT


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   615....620.........630.........640...... ...650........ .660.........670.........680.........690..
 
   291........300.........310.........320.........330.........340.........350.........360.........370
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Query Sequence  EPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKGV
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Template Sequence  KPVMIVTEME. NGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSR. . .
Template Known Secondary structure  SS


T.T
BTTTT
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   693......700.. .......710.........720.........730.........740.........750.........760........
 
   371........380.........390.........400.........410.........420.........430.........440.........450
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Query Sequence  AIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVELPVFI
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Template Sequence  . . . . . . VLKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPY. . WEMSNQDVIKAVDEG. YRLPPPMDCPAAL
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GGGS




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   770.........780.........790.........800.........810.. .......820....... ..830.........840
 
   451........460.........470.......
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Query Sequence  ANIFEQSRQYETEDRISSKQIIQIFKE
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Template Sequence  YQLMLDCWQKDRNNRPKFEQIVSILDK
Template Known Secondary structure  T
SSGGGS

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   854.....860.........870.........880
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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