Return to main results Retrieve Phyre Job Id

Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank257Aligned Residues261
% Identity25%Templatec2qkwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein kinase; PDBTitle: structural basis for activation of plant immunity by2 bacterial effector protein avrpto
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250.........260.........270.........280.........290....
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  EQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMKEPIM
Query Conservation          

 
 

 
  
            



 
               
   
  
 




             
Alig confidence 
























.....
















..






























Template Conservation    
     

 
 

 


     
.....  



 
         ..    
      
 
 

              
Template Sequence  NNFDHKFLIGHGVFGKVYKGVLRDG. . . . . AKVALKRRTPESSQGIE. . EFETEIETLSFCRHPHLVSLIGFCDERNEMI
Template Known Secondary structure 


S



S
B
SSS
TT
.....


S

SS..GGGS


TTB




TT

Template Predicted Secondary structure 










.....




..














Template SS confidence 















































































   3940.........50.........60... ......70.........80 .........90.........100.........110.
 
   295....300.........310. ........320.........330.........340.........350.........360.........370.
Predicted Secondary structure 





...
























Query SS confidence 
















. . .



























































Query Sequence  IVMEFCDGKSLEDALLS. . . KEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKGVA
Query Conservation 

 
    


   
  ...               

  

 


   







 



      

 




     
Alig confidence 
















...



























































Template Conservation                                                                                  
Template Sequence  LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTE
Template Known Secondary structure 

TT
BTGGGSSSS


S



TT
S


STT
TT




TT

SS
Template Predicted Secondary structure 










































Template SS confidence 















































































   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   372.. .....380.........390.........400.........410.........420.........430... ....
Predicted Secondary structure 


.


























.............


Query SS confidence 


.


























































. . . . . . . . . . . . .



Query Sequence  IKE. RKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAI. . . . . . . . . . . . . IGKR
Query Conservation     .         
 


 
       







  
 

 
 
  

             
.............    
Alig confidence 


.






































.


















.............



Template Conservation                               



 
  
 

 
.
  

                               
Template Sequence  LDQTHLVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC. ARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPN
Template Known Secondary structure  SS






S
TTT





T.

TT
S
SSSSS


TTTT


SSSSSS
Template Predicted Secondary structure 





















.



















Template SS confidence 















































































   192.......200.........210.........220.........230.... .....240.........250.........260.........270
 
   438.440.........450.........460.........470.........480...
Predicted Secondary structure 




















Query SS confidence 













































Query Sequence  ISLAVEVELPVFIANIFEQSRQYETEDRISSKQIIQIFKEEVGFHE
Query Conservation           
  
  

   
   
  


  

            
Alig confidence 













































Template Conservation                 

  

  

  


  


  
        
Template Sequence  LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE
Template Known Secondary structure 
TT
S
T
SSGGGS

SS
Template Predicted Secondary structure 












Template SS confidence 













































   273......280.........290.........300.........310........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D