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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank275Aligned Residues245
% Identity19%Templatec2pvmA_
PDB info PDB header:transferaseChain: A: PDB Molecule:casein kinase ii subunit alpha; PDBTitle: structure-based design of pyrazolo[1,5-a][1,3,5]triazine2 derivatives as potent inhibitors of protein kinase ck2
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250.........260.........270.........280.........290. .
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Query Sequence  EQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMKE. . P
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Template Sequence  DDYEVVRKVGRGKYSEVFEGINVNN. . . . NEKCIIKILKPVK. . . . . KKKIKREIKILQNLGGPNIVKLLDIVRDQHSKT
Template Known Secondary structure  GG
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TTT

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   37..40.........50.........60. ........70.... .....80.........90.........100.......
 
   293......300.........310.........320.........330.........340.........350... ......360.........370.
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Query Sequence  IMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLN. SKKILKISDFGLSVKGVA
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Template Sequence  PSLIFEYVNNTDFKVLYPT. . . . LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP
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GGG....

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SGGGTTTT


TT


T
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   109110.........120....... ..130.........140.........150.........160.........170.........180....
 
   372.......380.........390.. .......400.........410.........420.........430....
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Query Sequence  IKERKGGCLPVKYMAPETLKK. GLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAII. . . . . . . . . . . . . . . .
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Template Sequence  GKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIF. RKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRI
Template Known Secondary structure  T



S

S
GGG

TT

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T.T
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TT
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   185....190.........200.........210.........220....... ..230.........240.........250.........260...
 
   435....440.........450.........460.........470...
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Query Sequence  . . . . . . . . . . . . . . . . . . GKRISLAVEVELPVFIANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  ELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMT
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GGGG

TTTGGG

TT

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   264.....270.........280.........290.........300.........310.........320
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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