Return to main results Retrieve Phyre Job Id

Job DescriptionO01798
Confidence99.77%DateFri May 3 21:22:31 BST 2013
Rank322Aligned Residues101
% Identity28%Templatec2kk6A_
PDB info PDB header:transferaseChain: A: PDB Molecule:proto-oncogene tyrosine-protein kinase fer; PDBTitle: solution structure of sh2 domain of proto-oncogene tyrosine-2 protein kinase fer from homo sapiens, northeast structural3 genomics consortium (nesg) target hr3461d
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140.........150.........160.........170.........180......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  NNIDNFPFYHGFMGRNECEAMLSNHGDFLIRMTEIGKRVAYVISIKWKYQNIHVLVKRTKTKKLYWTKKYAFKSICELIA
Query Conservation    
   
  

   
     

   





 
         

                           
  
  

 
Alig confidence 

































.
























..

















Template Conservation    
    



 


  

 

   
 



 
 .       

      
 
  
    ..  
      
 

 


 
Template Sequence  KPLAEQDWYHGAIPRIEAQELLKKQGDFLVRESH. GKPGEYVLSVYSDGQRRHFIIQYVD. . NMYRFEGTGFSNIPQLID
Template Known Secondary structure 

TTT
TTS

T

STT

T.T
TT
TTT..TSSS
S
Template Predicted Secondary structure 















.









..








Template SS confidence 















































































   12.......20.........30.........40..... ....50.........60.........70 .........80........
 
   187..190...... ...200......... 210
Predicted Secondary structure 





..












.
Query SS confidence 









. .












.
Query Sequence  YHKRNHKPIY. . EGMTLICGLARHG. W
Query Conservation   
        ..             . 
Alig confidence 









..












.
Template Conservation   
              
  

 
   
Template Sequence  HHYTTKQVITKKSGVVLLNPIPKDKKW
Template Known Secondary structure  TT

S
TTTT



S







Template Predicted Secondary structure 



















Template SS confidence 


























   8990.........100.........110.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D