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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank146Aligned Residues261
% Identity18%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSA. . . . NEKILFLREANVMLTLS. . HPNVIKFYGVC
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Template Sequence  ESQYQVGPLLGSGGFGSVYSGIRVSD. . . . NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF
Template Known Secondary structure  TTTTT....TGGG



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   35....40.........50.........60 .........70.........80.........90.........100.........110
 
   288.290.........300.........310.........320.........330.........340.........350... ......360......
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Query Sequence  TMKEPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLN. SKKILKISDFGLS
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Template Sequence  ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG
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   111........120.........130.........140.........150.........160.........170.........180.........190
 
   367..370.........380.........390.........400.........410.........420.........430.........440......
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Query Sequence  VKGVAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVEL
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Template Sequence  ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHD. . . . . . . . EEIIGGQV. . FFRQRV
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   191........200.........210.........220.........230....... ..240..... ....250... ......
 
   447..450.........460.........470.........480.........490...
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Query Sequence  PVFIANIFEQSRQYETEDRISSKQIIQIFKEEVGFHEIETSGILHKL
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Template Sequence  SSECQHLIRWCLALRPSDRPTFEEIQN. . . . HPWMQDVLLPQETAEI
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   260.........270.........280...... ...290.........300..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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