Return to main results Retrieve Phyre Job Id

Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank10Aligned Residues269
% Identity30%Templatec2j0kB_
PDB info PDB header:transferaseChain: B: PDB Molecule:focal adhesion kinase 1; PDBTitle: crystal structure of a fragment of focal adhesion kinase2 containing the ferm and kinase domains.
Resolution3.0 Å
Model Dimensions (Å)X:59.483 Y:70.069 Z:51.779

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220.........230.........240.........250.........260.........270
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  NHKPIYEGMTLICGLARHGWQLNNEQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREAN
Query Conservation                       
          

 
 

 
  
            



 
               
  
Alig confidence 

















































.














.












Template Conservation     

         
      
      
 
 

 
 

 

 
      .     



  
   .       
  
  
Template Sequence  DYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPE. NPAMAVAIKTCKNCT. SDSVREKFLQEAL
Template Known Secondary structure 






TTS



STTB

GGG

SS



SS.S



TTTT.S
Template Predicted Secondary structure 

























.





.
Template SS confidence 















































































   396...400.........410.........420.........430.........440..... ....450.........460 .........470...
 
   271........280.........290.........300.........310.........320.........330.........340.........350
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  VMLTLSHPNVIKFYGVCTMKEPIMIVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNC
Query Conservation   
  
 




             

 
    


   
                 

  

 


   







 

Alig confidence 

















.




























































Template Conservation 

  
 




 
 
   .     



    


   
      
          


 

 


   


 


  

Template Sequence  TMRQFDHPHIVKLIGVIT. ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNV
Template Known Secondary structure  TT


TTB


.SSS


TT
BTTTT

TTT


S

SGGG
Template Predicted Secondary structure 




.





















Template SS confidence 















































































   474.....480.........490. ........500.........510.........520.........530.........540.........550..
 
   351........360.........370.........380.........390.........400.........410.........420.........430
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  LLNSKKILKISDFGLSVKGVAIKERKGGCLPVKYMAPETLKKGLYSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELR
Query Conservation 

      

 




                 
 


 
       







  
 

 
 
  

           
Alig confidence 
















............







































..








Template Conservation 

      

 





............  
   


 
        







 
 



 
  

..       
 
Template Sequence  LVSATDCVKLGDFGLSR. . . . . . . . . . . . LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF. . QGVKNNDVI
Template Known Secondary structure  TT






............

GGG





TTS

TT..TT

Template Predicted Secondary structure 










............














..



Template SS confidence 















































































   553......560......... 570.........580.........590.........600......... 610........
 
   431........440.........450.........460.........470.......
Predicted Secondary structure 



















Query SS confidence 














































Query Sequence  KAIIGKRISLAVEVELPVFIANIFEQSRQYETEDRISSKQIIQIFKE
Query Conservation    
             
  
  

   
   
  


  

      
Alig confidence 






.






































Template Conservation    
  
 .
   
   
  
  

  

  

  


   
   
  
Template Sequence  GRIENGE. RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST
Template Known Secondary structure  TT
.




TT

TT
SSGGGS

Template Predicted Secondary structure 


.















Template SS confidence 














































   633...... 640.........650.........660.........670........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D