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Job DescriptionO01798
Confidence100.00%DateFri May 3 21:22:31 BST 2013
Rank83Aligned Residues248
% Identity27%Templatec2cgvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:serine/threonine-protein kinase chk1; PDBTitle: identification of chemically diverse chk1 inhibitors by2 receptor-based virtual screening
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250.........260.........270.........280.........290....
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Query Sequence  EQVTLNKKLGEGQFGEVHKGSLKTSVFAAPVTVAVKTLHQNHLSANEKILFLREANVMLTLSHPNVIKFYGVCTMKEPIM
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Template Sequence  EDWDLVQTLGEGAYGEVQLAVNRVT. . . . EEAVAVKIVDMKRCPEN. . . . IKKEICINKMLNHENVVKFYGHRREGNIQY
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S



SSTTT....

TT


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STT
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   7..10.........20.........30. ........40........ .50.........60.........70........
 
   295....300.........310.........320.........330.........340.........350.........360.........370....
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Query Sequence  IVMEFCDGKSLEDALLSKEEKVSAEDKILYLFHAACGIDYLHGKQVIHRDIAARNCLLNSKKILKISDFGLSVKGVAIKE
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Template Sequence  LFLEYCSGGELFDRI. EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR
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TTGGGGS.BTTTB

TT
S

SGGG
TT




TT

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   82.......90...... ...100.........110.........120.........130.........140.........150.........160
 
   375....380.........390.... .....400.........410.........420.........430.........440.........450
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Query Sequence  . . . RKGGCLPVKYMAPETLKKGL. YSTASDIYSYGALMYEVYTDGKTPFETCGLRGNELRKAIIGKRISLAVEVELPVFI
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Template Sequence  ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA. GELPWD. QPSDSCQEYSDWKEKKTYLNPWKKIDSAP
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B
S

S
GGGS

SSB
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S
S.S

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   161........170.........180.........190.........200... ...... 210.........220.........230........
 
   451........460.........470...
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Query Sequence  ANIFEQSRQYETEDRISSKQIIQ
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Template Sequence  LALLHKILVENPSARITIPDIKK
Template Known Secondary structure  S
SSTTTS

TT
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   239240.........250.........260.
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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